RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 KCNJ3P48549 501 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 AQP4P55087 323 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 PIGYQ3MUY2 71 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 LINC00596Q86U02 117 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 RTN4RL2Q86UN3 420 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 JAGN1Q8N5M9 183 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 ZNF485Q8NCK3 441 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 OR2T6Q8NHC8 308 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 CORO2AQ92828 525 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 MYDGFQ969H8 173 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 ORAI1Q96D31 301 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 COQ2Q96H96 371 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 AJUBAQ96IF1 538 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 NKX3-1Q99801 234 aaPredicted RBP12.63□□□□□ -0.39
MRPL55-226ENST00000473066 BARHL1Q9BZE3 327 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 IL36GQ9NZH8 169 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 NKX1-2Q9UD57 310 aaPredicted RBP12.63□□□□□ -0.39
MRPL55-226ENST00000473066 ST3GAL6Q9Y274 331 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 HILPDAQ9Y5L2 63 aa12.63□□□□□ -0.39
MRPL55-226ENST00000473066 MEIKINA0A087WXM9 373 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 VGLL3A8MV65 326 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 TOR1AO14656 332 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 CDK1P06493 297 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 IGFBP3P17936 291 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-226ENST00000473066 RBM11P57052 281 aaKnown RBP12.62□□□□□ -0.39
MRPL55-226ENST00000473066 PROK1P58294 105 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 GPR176Q14439 515 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 LAIR2Q6ISS4 152 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 C11orf88Q6PI97 169 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 ASCL4Q6XD76 172 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 ABHD12Q8N2K0 398 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 NANOGP1Q8N7R0 232 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 ZNF565Q8N9K5 539 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 NEK7Q8TDX7 302 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 PPIL3Q9H2H8 161 aaKnown RBP12.62□□□□□ -0.39
MRPL55-226ENST00000473066 TCF7L1Q9HCS4 588 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 KIF25Q9UIL4 384 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 TCF19Q9Y242 345 aa12.62□□□□□ -0.39
MRPL55-226ENST00000473066 FAM172BPA6NC97 362 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 PTGES3LE9PB15 166 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 GPX5O75715 221 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 CD1AP06126 327 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 GTF2F2P13984 249 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 NFYBP25208 207 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 CEACAM3P40198 252 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 BDH1Q02338 343 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 MPV17LQ2QL34 196 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 SLC22A6Q4U2R8 563 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 ARSJQ5FYB0 599 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-226ENST00000473066 NHLRC3Q5JS37 347 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 C6orf141Q5SZD1 244 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 SLC35E4Q6ICL7 350 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 DYNAPQ8N1N2 210 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 NKAIN3Q8N8D7 197 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 CREB3L1Q96BA8 519 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 CITED1Q99966 193 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 DPCDQ9BVM2 203 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-226ENST00000473066 CDCA4Q9BXL8 241 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 FKBP14Q9NWM8 211 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 FBLN5Q9UBX5 448 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 FOXJ3Q9UPW0 622 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 MRPS28Q9Y2Q9 187 aaKnown RBP12.61□□□□□ -0.39
MRPL55-226ENST00000473066 TPRKBQ9Y3C4 175 aa12.61□□□□□ -0.39
MRPL55-226ENST00000473066 TRAV8-7A0A075B6U6 113 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 TRBV5-7A0A0A0MS05 114 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 TRAV24A0A0B4J272 114 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 A0A1W2PPK0 400 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 MMP23AO75900 390 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 MAS1P04201 325 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 PRRX1P54821 245 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 RPS11P62280 158 aaKnown RBP eCLIP12.6□□□□□ -0.39
MRPL55-226ENST00000473066 SRSF4Q08170 494 aaKnown RBP12.6□□□□□ -0.39
MRPL55-226ENST00000473066 DOC2BQ14184 412 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 ATAD3CQ5T2N8 411 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 AWAT2Q6E213 333 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 TREML4Q6UXN2 200 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 Q8NFD4 153 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 CAPSLQ8WWF8 208 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 MUL1Q969V5 352 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 DERL3Q96Q80 235 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 NCOR1P1Q9H4R4 102 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 CALYQ9NYX4 217 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 DPM3Q9P2X0 92 aa12.6□□□□□ -0.39
MRPL55-226ENST00000473066 AMMECR1Q9Y4X0 333 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-226ENST00000473066 KBTBD11-OT1A0A1B0GTJ5 212 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 TMEM30CPA0ZSE6 113 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 MAGEA13PA6NCF6 341 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 LEUTXA8MZ59 168 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 GEMIN2O14893 280 aaKnown RBP12.59□□□□□ -0.39
MRPL55-226ENST00000473066 CHST1O43916 411 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 CD34P28906 385 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 BRS3P32247 399 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 KIR2DS4P43632 304 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 HSPA13P48723 471 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 DYNLT3P51808 116 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 RBM39Q14498 530 aaKnown RBP12.59□□□□□ -0.39
MRPL55-226ENST00000473066 MED22Q15528 200 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 RNLSQ5VYX0 342 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 Q6ZTK2 550 aa12.59□□□□□ -0.39
MRPL55-226ENST00000473066 TMEM219Q86XT9 240 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms