RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 FBLN5Q9UBX5 448 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 UBE2J1Q9Y385 318 aaPredicted RBP17.07■□□□□ 0.32
TOP3A-204ENST00000472959 NF1P21359 2839 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 TRGV10A0A0A0MS01 117 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 TRAV40A0A0B4J280 105 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 ODAMA1E959 279 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 NOTOA8MTQ0 251 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 AIPO00170 330 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 RBP4P02753 201 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 GLAP06280 429 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 IGHV4-38-2P0DP08 117 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 GLIPR1P48060 266 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 RBM39Q14498 530 aaKnown RBP17.06■□□□□ 0.32
TOP3A-204ENST00000472959 ATXN7L3Q14CW9 347 aaPredicted RBP17.06■□□□□ 0.32
TOP3A-204ENST00000472959 HES5Q5TA89 166 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 NCR3LG1Q68D85 454 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 OR10K2Q6IF99 312 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 BPIFB2Q8N4F0 458 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 TPRX1Q8N7U7 411 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 OR51D1Q8NGF3 324 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 OR13F1Q8NGS4 319 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 CORO2AQ92828 525 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 COQ2Q96H96 371 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 ZNF714Q96N38 554 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 TM2D1Q9BX74 207 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 OR6C3Q9NZP0 311 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 ZNF581Q9P0T4 197 aa17.06■□□□□ 0.32
TOP3A-204ENST00000472959 CENPVL3A0A0U1RRI6 287 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 C17orf98A8MV24 154 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 MCRIP1C9JLW8 97 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 CCL3L1P16619 93 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 FUT3P21217 361 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 SDC2P34741 201 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 DLX6P56179 175 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 CLDN12P56749 244 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 GUCA2AQ02747 115 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 UNC119Q13432 240 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 C2orf76Q3KRA6 126 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 RAB12Q6IQ22 244 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 C11orf42Q8N5U0 333 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 LHX4Q969G2 390 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 URM1Q9BTM9 101 aaKnown RBP17.05■□□□□ 0.32
TOP3A-204ENST00000472959 SIRT7Q9NRC8 400 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 ZFHX3Q15911 3703 aa17.05■□□□□ 0.32
TOP3A-204ENST00000472959 SVEP1Q4LDE5 3571 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 SLC35E4Q6ICL7 350 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 C9orf139Q6ZV77 190 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 TCF23Q7RTU1 214 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 TRAPPC6BQ86SZ2 158 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 NR2C2APQ86WQ0 139 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 NEK7Q8TDX7 302 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 TNFRSF14Q92956 283 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 FUNDC2Q9BWH2 189 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 MS4A7Q9GZW8 240 aaPredicted RBP17.04■□□□□ 0.32
TOP3A-204ENST00000472959 TAS2R3Q9NYW6 316 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 ZNF69Q9UC07 566 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 PEX16Q9Y5Y5 336 aa17.04■□□□□ 0.32
TOP3A-204ENST00000472959 IGHV3OR16-10A0A075B7F0 116 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 IGHV1-69DA0A0B4J2H0 117 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 LDLRAD4O15165 306 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 PDCD6O75340 191 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 IGHV1-69P01742 117 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 ERVFRD-1P60508 538 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 FAM189A2Q15884 450 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 RSBN1Q5VWQ0 802 aaPredicted RBP17.03■□□□□ 0.32
TOP3A-204ENST00000472959 SIGIRRQ6IA17 410 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 ZNF565Q8N9K5 539 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 PLPPR1Q8TBJ4 325 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 NEDD4LQ96PU5 975 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 GAL3ST2Q9H3Q3 398 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 KCNK15Q9H427 330 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 RNF167Q9H6Y7 350 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 HEXA-AS1Q9H8Q6 139 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 ING3Q9NXR8 418 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 KIF25Q9UIL4 384 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 RAB22AQ9UL26 194 aa17.03■□□□□ 0.32
TOP3A-204ENST00000472959 JMJD1CQ15652 2540 aa17.02■□□□□ 0.32
TOP3A-204ENST00000472959 MEIKINA0A087WXM9 373 aa17.02■□□□□ 0.32
TOP3A-204ENST00000472959 TMEM30CPA0ZSE6 113 aa17.02■□□□□ 0.32
TOP3A-204ENST00000472959 CA11O75493 328 aa17.02■□□□□ 0.32
TOP3A-204ENST00000472959 BRICD5Q6PL45 260 aa17.02■□□□□ 0.32
TOP3A-204ENST00000472959 FAM89BQ8N5H3 189 aa17.02■□□□□ 0.32
TOP3A-204ENST00000472959 LPAR5Q9H1C0 372 aa17.02■□□□□ 0.32
TOP3A-204ENST00000472959 OCEL1Q9H607 264 aa17.02■□□□□ 0.32
TOP3A-204ENST00000472959 LIN7BQ9HAP6 207 aa17.02■□□□□ 0.32
TOP3A-204ENST00000472959 TMEM272A0A1B0GTI8 110 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 MEX3AA1L020 520 aaKnown RBP17.01■□□□□ 0.31
TOP3A-204ENST00000472959 RNASEK-C17orf49H0YIS7 233 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 TMEM127O75204 238 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 TFAP2AP05549 437 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 ALDH3B2P48448 385 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 UBE2E1P51965 193 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 MXD1Q05195 221 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 TUSC1Q2TAM9 212 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 SFXN4Q6P4A7 337 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 ZNF497Q6ZNH5 498 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 ZNF418Q8TF45 676 aaPredicted RBP17.01■□□□□ 0.31
TOP3A-204ENST00000472959 PTX4Q96A99 478 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 SUCNR1Q9BXA5 334 aa17.01■□□□□ 0.31
TOP3A-204ENST00000472959 ETAA1Q9NY74 926 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms