RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ATAD3CQ5T2N8 411 aa16.46■□□□□ 0.23
SF1-213ENST00000472725 GPR107Q5VW38 600 aa16.46■□□□□ 0.23
SF1-213ENST00000472725 OR10K2Q6IF99 312 aa16.46■□□□□ 0.23
SF1-213ENST00000472725 FAM185AQ8N0U4 392 aa16.46■□□□□ 0.23
SF1-213ENST00000472725 CORO2AQ92828 525 aa16.46■□□□□ 0.23
SF1-213ENST00000472725 NEDD4LQ96PU5 975 aa16.46■□□□□ 0.23
SF1-213ENST00000472725 SIRPDQ9H106 197 aa16.46■□□□□ 0.23
SF1-213ENST00000472725 LPAR5Q9H1C0 372 aa16.46■□□□□ 0.23
SF1-213ENST00000472725 UNKLQ9H9P5 680 aaKnown RBP16.46■□□□□ 0.23
SF1-213ENST00000472725 OR6C3Q9NZP0 311 aa16.46■□□□□ 0.23
SF1-213ENST00000472725 UBE2J1Q9Y385 318 aaPredicted RBP16.46■□□□□ 0.23
SF1-213ENST00000472725 TMEM272A0A1B0GTI8 110 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 TOX4O94842 621 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 TMBIM6P55061 237 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 BPIFB3P59826 476 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 LSM3P62310 102 aaKnown RBP16.45■□□□□ 0.22
SF1-213ENST00000472725 ARF6P62330 175 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 KRBOX4Q5JUW0 171 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 SLC35E4Q6ICL7 350 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 RAB12Q6IQ22 244 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 C1orf229Q6ZS94 237 aaPredicted RBP16.45■□□□□ 0.22
SF1-213ENST00000472725 OR4M1Q8NGD0 313 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 OR56B1Q8NGI3 324 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 RAB2BQ8WUD1 216 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 METTL8Q9H825 291 aaKnown RBP16.45■□□□□ 0.22
SF1-213ENST00000472725 TAS2R3Q9NYW6 316 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 ONECUT1Q9UBC0 465 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 DAPK2Q9UIK4 370 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 ETV7Q9Y603 341 aa16.45■□□□□ 0.22
SF1-213ENST00000472725 TRGV10A0A0A0MS01 117 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 ODAMA1E959 279 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 METTL21EPA6NDL7 271 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 AVPP01185 164 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 CLEC2LP0C7M8 214 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 RPS19P39019 145 aaKnown RBP16.44■□□□□ 0.22
SF1-213ENST00000472725 NCS1P62166 190 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 AESQ08117 197 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 SIGIRRQ6IA17 410 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 METAP1DQ6UB28 335 aaPredicted RBP16.44■□□□□ 0.22
SF1-213ENST00000472725 USP43Q70EL4 1123 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 COQ2Q96H96 371 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 ABRACLQ9P1F3 81 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 HSF4Q9ULV5 492 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 PEX16Q9Y5Y5 336 aa16.44■□□□□ 0.22
SF1-213ENST00000472725 SCGNO76038 276 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 FSHBP01225 129 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 ZNF728P0DKX0 622 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 SLC2A2P11168 524 aaPredicted RBP16.43■□□□□ 0.22
SF1-213ENST00000472725 CHATP28329 748 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 SERPINB10P48595 397 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 VBP1P61758 197 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 ATXN7L3Q14CW9 347 aaPredicted RBP16.43■□□□□ 0.22
SF1-213ENST00000472725 RSBN1Q5VWQ0 802 aaPredicted RBP16.43■□□□□ 0.22
SF1-213ENST00000472725 BPIFB2Q8N4F0 458 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 ZNF565Q8N9K5 539 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 NEK7Q8TDX7 302 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 SLC25A46Q96AG3 418 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 KCTD12Q96CX2 325 aaKnown RBP16.43■□□□□ 0.22
SF1-213ENST00000472725 ZNF714Q96N38 554 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 GAL3ST2Q9H3Q3 398 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 KCNK15Q9H427 330 aa16.43■□□□□ 0.22
SF1-213ENST00000472725 TMEM30CPA0ZSE6 113 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 SMIM30A4D0T7 59 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 C17orf98A8MV24 154 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 HSPB6O14558 160 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 PRTN3P24158 256 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 BLVRBP30043 206 aaPredicted RBP16.42■□□□□ 0.22
SF1-213ENST00000472725 SRP14P37108 136 aaKnown RBP16.42■□□□□ 0.22
SF1-213ENST00000472725 GLIPR1P48060 266 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 DYNC1I2Q13409 638 aaKnown RBP16.42■□□□□ 0.22
SF1-213ENST00000472725 ZNF273Q14593 569 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 ARL6IP1Q15041 203 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 IDNKQ5T6J7 187 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 NCR3LG1Q68D85 454 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 CLVS1Q8IUQ0 354 aaPredicted RBP16.42■□□□□ 0.22
SF1-213ENST00000472725 GAPTQ8N292 157 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 NICN1Q9BSH3 213 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 NAA50Q9GZZ1 169 aaKnown RBP16.42■□□□□ 0.22
SF1-213ENST00000472725 ZNF581Q9P0T4 197 aa16.42■□□□□ 0.22
SF1-213ENST00000472725 POM121CA8CG34 1229 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 FOXI3A8MTJ6 420 aaPredicted RBP16.41■□□□□ 0.22
SF1-213ENST00000472725 NOL3O60936 208 aaKnown RBP16.41■□□□□ 0.22
SF1-213ENST00000472725 FAM157CP0CG43 387 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 SRD5A1P18405 259 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 TGFBR1P36897 503 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 DLX6P56179 175 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 ERVFRD-1P60508 538 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 GUCA2AQ02747 115 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 ZNF497Q6ZNH5 498 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 TCF23Q7RTU1 214 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 Q8N7P7 452 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 TPRX1Q8N7U7 411 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 PLPPR1Q8TBJ4 325 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 TBX15Q96SF7 602 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 PCGF1Q9BSM1 259 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 PLEKHJ1Q9NW61 149 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 ETAA1Q9NY74 926 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 NUP50Q9UKX7 468 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 SPATA2Q9UM82 520 aa16.41■□□□□ 0.22
SF1-213ENST00000472725 NSD1Q96L73 2696 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms