RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 TRAV39A0A0B4J263 110 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 KBTBD11-OT1A0A1B0GTJ5 212 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 LOC107986453A0A1B0GWG9 222 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 A0A1W2PQL4 384 aaPredicted RBP7.26□□□□□ -1.25
VCL-204ENST00000472585 ZNF736B4DX44 427 aaPredicted RBP7.26□□□□□ -1.25
VCL-204ENST00000472585 SH2D1BO14796 132 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 FGF16O43320 207 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 KDM4BO94953 1096 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 APOL3O95236 402 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 IGKV1D-33P01593 117 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 IGKV1-33P01594 117 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 ANXA8P13928 327 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 TMEM11P17152 192 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 ATF1P18846 271 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 NFYBP25208 207 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 CEACAM3P40198 252 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 MNDAP41218 407 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 GPR12P47775 334 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 CDX1P47902 265 aaPredicted RBP7.26□□□□□ -1.25
VCL-204ENST00000472585 RBP2P50120 134 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 INSL3P51460 131 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 MTCP1P56278 107 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 CDC42P60953 191 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 SCN1BQ07699 218 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 FHL3Q13643 280 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 HES1Q14469 280 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 PNLIPRP3Q17RR3 467 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 KRBOX4Q5JUW0 171 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 SPIN3Q5JUX0 258 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 FAHD1Q6P587 224 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 Q8N6K4 173 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 TCEANCQ8N8B7 351 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 YIPF7Q8N8F6 280 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 DNAAF1Q8NEP3 725 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 OR4D6Q8NGJ1 314 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 OR10AC1Q8NH08 325 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 OR9G1Q8NH87 305 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 RFESDQ8TAC1 157 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 FGGYQ96C11 551 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 IL4I1Q96RQ9 567 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 OSBPL10Q9BXB5 764 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 LINC00574Q9H8X3 128 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 EXOSC4Q9NPD3 245 aaKnown RBP7.26□□□□□ -1.25
VCL-204ENST00000472585 ZNF581Q9P0T4 197 aa7.26□□□□□ -1.25
VCL-204ENST00000472585 METTL15A6NJ78 407 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 ZNF729A6NN14 1252 aaPredicted RBP7.25□□□□□ -1.25
VCL-204ENST00000472585 NPIPB11E5RHQ5 1161 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 ZNF670-ZNF695F2Z2N8 137 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 GNGT2O14610 69 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 GATBO75879 557 aaKnown RBP7.25□□□□□ -1.25
VCL-204ENST00000472585 CSN2P05814 226 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 PTGFRP43088 359 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 VEGFCP49767 419 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 ATP1B3P54709 279 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 NANOS3P60323 173 aaKnown RBP7.25□□□□□ -1.25
VCL-204ENST00000472585 ISL1P61371 349 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 ATXN7L3Q14CW9 347 aaPredicted RBP7.25□□□□□ -1.25
VCL-204ENST00000472585 NXNL2Q5VZ03 156 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 TEX38Q6PEX7 206 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 LHFPL2Q6ZUX7 228 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 Q8IYB0 196 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 Q8N9W7 124 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 OR5D18Q8NGL1 313 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 PLPPR1Q8TBJ4 325 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 TOMM40LQ969M1 308 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 RPEQ96AT9 228 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 CREB3L1Q96BA8 519 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 CCDC124Q96CT7 223 aaKnown RBP7.25□□□□□ -1.25
VCL-204ENST00000472585 RNFT2Q96EX2 444 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 EAF1Q96JC9 268 aaPredicted RBP7.25□□□□□ -1.25
VCL-204ENST00000472585 HSPB9Q9BQS6 159 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 ABCG5Q9H222 651 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 KLK15Q9H2R5 256 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 EDA2RQ9HAV5 297 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 PLEKHA1Q9HB21 404 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 KIF25Q9UIL4 384 aa7.25□□□□□ -1.25
VCL-204ENST00000472585 TRAV24A0A0B4J272 114 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 CCRL2O00421 344 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 LDLRAD4O15165 306 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 SLC25A17O43808 307 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 ZNF44P15621 663 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 HTR1FP30939 366 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 REG1BP48304 166 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 GNG10P50151 68 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 GYS2P54840 703 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 ZNF85Q03923 595 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 FOXE3Q13461 319 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 GPR50Q13585 617 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 LTC4SQ16873 150 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 TP53I3Q53FA7 332 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 CXorf66Q5JRM2 361 aaPredicted RBP7.24□□□□□ -1.25
VCL-204ENST00000472585 C12orf73Q69YU5 71 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 CCDC144NLQ6NUI1 221 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 UTS2BQ765I0 119 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 FOXRED2Q8IWF2 684 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 OR11H1Q8NG94 326 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 OR51A4Q8NGJ6 313 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 OR51T1Q8NGJ9 327 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 IL17DQ8TAD2 202 aa7.24□□□□□ -1.25
VCL-204ENST00000472585 TMEM163Q8TC26 289 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms