RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ATAD3CQ5T2N8 411 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 BCL6BQ8N143 479 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-211ENST00000472490 TPRX1Q8N7U7 411 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 SUMF2Q8NBJ7 301 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 CORO2AQ92828 525 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 TNFRSF14Q92956 283 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 DPCDQ9BVM2 203 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-211ENST00000472490 SELENOIQ9C0D9 397 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 ZMAT3Q9HA38 289 aaKnown RBP11.64□□□□□ -0.55
BRCA1-211ENST00000472490 V9GY05 133 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 NF1P21359 2839 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 A0A1W2PP11 408 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 ODAMA1E959 279 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 MCRIP1C9JLW8 97 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 RNASEK-C17orf49H0YIS7 233 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 SLC17A2O00624 439 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 NPFFO15130 113 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 ARSBP15848 533 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 GLIPR1P48060 266 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 TUSC1Q2TAM9 212 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 MIDNQ504T8 468 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 RUSC1-AS1Q66K80 236 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 OR52W1Q6IF63 320 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 PDZD9Q8IXQ8 264 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 SIGLECL1Q8N7X8 197 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 OR13D1Q8NGV5 346 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 NEK7Q8TDX7 302 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 C1orf147Q96MC9 270 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-211ENST00000472490 TMEM59Q9BXS4 323 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 BANF2Q9H503 90 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 ZNF696Q9H7X3 374 aa11.63□□□□□ -0.55
BRCA1-211ENST00000472490 AK6Q9Y3D8 172 aaKnown RBP11.63□□□□□ -0.55
BRCA1-211ENST00000472490 MEIKINA0A087WXM9 373 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 CLPXO76031 633 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 PAHP00439 452 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 GLAP06280 429 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 FBP1P09467 338 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 IGHV1-8P0DP01 117 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 LGALS4P56470 323 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 BAMBIQ13145 260 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 FAM189A2Q15884 450 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 RAB11BQ15907 218 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 DEFB112Q30KQ8 113 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 TIMM50Q3ZCQ8 353 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 C22orf42Q6IC83 251 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 OR2W3Q7Z3T1 314 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 C11orf42Q8N5U0 333 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 TMEM104Q8NE00 496 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 FAM46BQ96A09 425 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 COQ2Q96H96 371 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 Q96M66 194 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 URM1Q9BTM9 101 aaKnown RBP11.62□□□□□ -0.55
BRCA1-211ENST00000472490 PRDM13Q9H4Q3 707 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 ING3Q9NXR8 418 aa11.62□□□□□ -0.55
BRCA1-211ENST00000472490 NIPBLQ6KC79 2804 aaeCLIP11.61□□□□□ -0.55
BRCA1-211ENST00000472490 C2CD3Q4AC94 2353 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 TMEM30CPA0ZSE6 113 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 MEIOCA2RUB1 952 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 ZNF729A6NN14 1252 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-211ENST00000472490 RNF212BA8MTL3 300 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 CLDN34H7C241 214 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 CA11O75493 328 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 VENTXO95231 258 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 MPIG6BO95866 241 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 VSIG8P0DPA2 414 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 CD36P16671 472 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 RAB3BP20337 219 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 GZMHP20718 246 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 FUT3P21217 361 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 SAA4P35542 130 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 DLX6P56179 175 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 KLRD1Q13241 179 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 SLC35E4Q6ICL7 350 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 RAB12Q6IQ22 244 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 HEPN1Q6WQI6 88 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 ZNF782Q6ZMW2 699 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-211ENST00000472490 TCF23Q7RTU1 214 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 TPRA1Q86W33 373 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 SLC25A28Q96A46 364 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 NEDD4LQ96PU5 975 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 TXNL4BQ9NX01 149 aaKnown RBP11.61□□□□□ -0.55
BRCA1-211ENST00000472490 RCC2Q9P258 522 aaKnown RBP11.61□□□□□ -0.55
BRCA1-211ENST00000472490 STEAP1Q9UHE8 339 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 PEX16Q9Y5Y5 336 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 SESN1Q9Y6P5 492 aa11.61□□□□□ -0.55
BRCA1-211ENST00000472490 SETD2Q9BYW2 2564 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-211ENST00000472490 KBTBD11-OT1A0A1B0GTJ5 212 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 RPS27AP62979 156 aaKnown RBP11.6□□□□□ -0.55
BRCA1-211ENST00000472490 RSBN1Q5VWQ0 802 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-211ENST00000472490 Q6YL49 198 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 GDPGP1Q6ZNW5 385 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 RTN4RL2Q86UN3 420 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 OR11H6Q8NGC7 330 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 FAM216AQ8WUB2 273 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 SSMEM1Q8WWF3 244 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 KCTD7Q96MP8 289 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 ZNF48Q96MX3 618 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-211ENST00000472490 DPAGT1Q9H3H5 408 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 RAB9BQ9NP90 201 aa11.6□□□□□ -0.55
BRCA1-211ENST00000472490 KIF25Q9UIL4 384 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms