RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 TMEM171Q8WVE6 324 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GABARAPL3Q9BY60 117 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CALCRP30988 508 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 LYG2Q86SG7 212 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 OR5C1Q8NGR4 320 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GPR137Q96N19 417 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ASCL3Q9NQ33 180 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 KNDC1Q76NI1 1749 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TMEM102Q8N9M5 508 aaPredicted RBP11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ELOVL1Q9BW60 279 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 HILPDAQ9Y5L2 63 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ANKRD33Q7Z3H0 272 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TET1Q8NFU7 2136 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 HYAL1Q12794 435 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PMS2P11Q13670 270 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MOGAT3Q86VF5 341 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 IGLV3-10A0A075B6K4 115 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 IL9P15248 144 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 FAM222BQ8WU58 562 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 LANCL1O43813 399 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 IGHV4-34P06331 123 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GABRB1P18505 474 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SLC38A11Q08AI6 406 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TWIST1Q15672 202 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZNF429Q86V71 674 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PLA2G2FQ9BZM2 168 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 LOXL3P58215 753 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PIK3IP1Q96FE7 263 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 P2RX4Q99571 388 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 DOK1Q99704 481 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CCL27Q9Y4X3 112 aa11.76□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SLC25A20O43772 301 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 IGHA1P01876 353 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 IGHA2P01877 340 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 DLEU7Q6UYE1 221 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 LPAR5Q9H1C0 372 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SPTY2D1-AS1A0A0U1RR47 76 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 Q8IYB0 196 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 NSUN5P2Q63ZY6 315 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 NUFIP2Q7Z417 695 aaKnown RBP11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SSMEM1Q8WWF3 244 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 C19orf43Q9BQ61 176 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TECRQ9NZ01 308 aaKnown RBP11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MPZL1O95297 269 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CELA2BP08218 269 aaPredicted RBP11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MAGEA5P43359 124 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CDK5R1Q15078 307 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SERGEFQ9UGK8 458 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TMEM129A0AVI4 362 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 HLXQ14774 488 aaPredicted RBP11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PWWP2BQ6NUJ5 590 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 DND1Q8IYX4 353 aaKnown RBP11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MYEOVQ96EZ4 313 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 C1RLQ9NZP8 487 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 JUNBP17275 347 aaPredicted RBP11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 DDOSTP39656 456 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 WDR73Q6P4I2 378 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 DHRS4L2Q6PKH6 230 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PP6455Q8WZ26 134 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CXXC4Q9H2H0 198 aa11.75□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PYCARD-AS1I3L0S3 204 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZNF737O75373 536 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CTU2Q2VPK5 515 aaKnown RBP11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 C19orf48Q6RUI8 117 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 C10orf90Q96M02 699 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GEMIN7Q9H840 131 aaKnown RBP11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MFSD2BA6NFX1 497 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MALP21145 153 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 UBE2L3P68036 154 aaKnown RBP11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 IGFBP7Q16270 282 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CT55Q8WUE5 264 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MFNGO00587 321 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GPX5O75715 221 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZNF688P0C7X2 276 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PTGFRP43088 359 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TMEM183AQ8IXX5 376 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TBX15Q96SF7 602 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 NTN1O95631 604 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GFRA1P56159 465 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SNAI3Q3KNW1 292 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ZNF485Q8NCK3 441 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CNRIP1Q96F85 164 aaPredicted RBP11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 C16orf92Q96LL3 132 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 NPAS1Q99742 590 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 PARP11Q9NR21 331 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TOPAZ1Q8N9V7 1692 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GEMIN2O14893 280 aaKnown RBP11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ERVS71-1P61550 626 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TMEM128Q5BJH2 165 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 OTUD1Q5VV17 481 aaPredicted RBP11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 IGSF11Q5DX21 431 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 OR2D3Q8NGH3 330 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 NEIL1Q96FI4 390 aaPredicted RBP11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 IL21Q9HBE4 155 aa11.74□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 GAGE10A6NGK3 116 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TSPO2Q5TGU0 170 aa11.73□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TEX29Q8N6K0 151 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms