RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 WDR55Q9H6Y2 383 aaPredicted RBP0.05□□□□□ -2.4
COMMD3-209ENST00000471350 VCX3AQ9NNX9 186 aa0.05□□□□□ -2.4
COMMD3-209ENST00000471350 KLF12Q9Y4X4 402 aa0.05□□□□□ -2.4
COMMD3-209ENST00000471350 ZFHX2Q9C0A1 2572 aaPredicted RBP0.05□□□□□ -2.4
COMMD3-209ENST00000471350 ATG2BQ96BY7 2078 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 TRBV6-5A0A0K0K1A5 114 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 A0A1B0GVG6 124 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 FAM240AA0A1B0GVK7 77 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 VPS37CA5D8V6 355 aaPredicted RBP0.04□□□□□ -2.4
COMMD3-209ENST00000471350 H7C2Y5 167 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 DENRO43583 198 aaKnown RBP0.04□□□□□ -2.4
COMMD3-209ENST00000471350 SPOPO43791 374 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 CRYGDP07320 174 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 OR5AL1P0C617 328 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 ERHP84090 104 aaKnown RBP0.04□□□□□ -2.4
COMMD3-209ENST00000471350 TSPAN31Q12999 210 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 SYT6Q5T7P8 510 aaPredicted RBP0.04□□□□□ -2.4
COMMD3-209ENST00000471350 NXNL2Q5VZ03 156 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 AGTRAPQ6RW13 159 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 SDIM1Q6ZPB5 146 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 TPGS1Q6ZTW0 290 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 C2orf91Q6ZV80 131 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 ZFAND2AQ8N6M9 145 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 C8orf31Q8N9H6 132 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 SPPL2BQ8TCT7 592 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 CD200R1Q8TD46 325 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 CASTOR1Q8WTX7 329 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 PDCD6IPQ8WUM4 868 aaKnown RBP0.04□□□□□ -2.4
COMMD3-209ENST00000471350 TSNAXQ99598 290 aaKnown RBP0.04□□□□□ -2.4
COMMD3-209ENST00000471350 TSSK6Q9BXA6 273 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 ZNF436Q9C0F3 470 aaPredicted RBP0.04□□□□□ -2.4
COMMD3-209ENST00000471350 FAM192AQ9GZU8 254 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 COA1Q9GZY4 146 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 MED9Q9NWA0 146 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 GCNT4Q9P109 453 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 PRO2289Q9P1D8 64 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 PEF1Q9UBV8 284 aaKnown RBP0.04□□□□□ -2.4
COMMD3-209ENST00000471350 PLXNB3Q9ULL4 1909 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 WDR19Q8NEZ3 1342 aa0.04□□□□□ -2.4
COMMD3-209ENST00000471350 MEIKINA0A087WXM9 373 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 OR2AG2A6NM03 316 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 PRMT5O14744 637 aaPredicted RBP0.03□□□□□ -2.4
COMMD3-209ENST00000471350 GSTM3P21266 225 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 CD200P41217 278 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 AKR1C2P52895 323 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 HCCSP53701 268 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 RAB25P57735 213 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 Q499Y3 187 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 RPS19BP1Q86WX3 136 aaKnown RBP0.03□□□□□ -2.4
COMMD3-209ENST00000471350 KRTCAP2Q8N6L1 136 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 LFNGQ8NES3 379 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 OR8B12Q8NGG6 310 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 TCP10LQ8TDR4 215 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 C16orf78Q8WTQ4 265 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 KCTD4Q8WVF5 259 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 PITX2Q99697 317 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 PECRQ9BY49 303 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 SHCBP1LQ9BZQ2 653 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 SMDT1Q9H4I9 107 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 ELOVL6Q9H5J4 265 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 ARMC7Q9H6L4 198 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 GEMIN7Q9H840 131 aaKnown RBP0.03□□□□□ -2.4
COMMD3-209ENST00000471350 VPS37BQ9H9H4 285 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 C12orf4Q9NQ89 552 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 C8orf4Q9NR00 106 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 USH1CQ9Y6N9 552 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 NRCAMQ92823 1304 aa0.03□□□□□ -2.4
COMMD3-209ENST00000471350 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.02□□□□□ -2.41
COMMD3-209ENST00000471350 IGHV3OR15-7A0A075B7D8 119 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 A8MUN3 132 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 CPLX1O14810 134 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 MRPS14O60783 128 aaKnown RBP0.02□□□□□ -2.41
COMMD3-209ENST00000471350 EVI2BP34910 448 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 HMGN5P82970 282 aaKnown RBP0.02□□□□□ -2.41
COMMD3-209ENST00000471350 HOXC5Q00444 222 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 ZNF90Q03938 601 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 NNATQ16517 81 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 PSG3Q16557 428 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 TMEM53Q6P2H8 277 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 NELFCDQ8IXH7 590 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 SLC35F6Q8N357 371 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 PQLC3Q8N755 202 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 TSEN15Q8WW01 171 aaKnown RBP0.02□□□□□ -2.41
COMMD3-209ENST00000471350 REEP6Q96HR9 211 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 ANP32EQ9BTT0 268 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 NAA50Q9GZZ1 169 aaKnown RBP0.02□□□□□ -2.41
COMMD3-209ENST00000471350 SLC38A1Q9H2H9 487 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 STK38LQ9Y2H1 464 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 WASHC3Q9Y3C0 194 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 C22orf24Q9Y442 160 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 PTPRJQ12913 1337 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 SBNO1A3KN83 1393 aa0.02□□□□□ -2.41
COMMD3-209ENST00000471350 COL18A1P39060 1754 aa0.01□□□□□ -2.41
COMMD3-209ENST00000471350 FN1P02751 2386 aaKnown RBP0.01□□□□□ -2.41
COMMD3-209ENST00000471350 DHRS12A0PJE2 317 aa0.01□□□□□ -2.41
COMMD3-209ENST00000471350 PGPA6NDG6 321 aa0.01□□□□□ -2.41
COMMD3-209ENST00000471350 LRRIQ4A6NIV6 560 aa0.01□□□□□ -2.41
COMMD3-209ENST00000471350 C2orf74A8MZ97 194 aa0.01□□□□□ -2.41
COMMD3-209ENST00000471350 SCN2BO60939 215 aa0.01□□□□□ -2.41
COMMD3-209ENST00000471350 CD9P21926 228 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms