RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 VIRMAQ69YN4 1812 aaKnown RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 ARHGEF28Q8N1W1 1705 aaKnown RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 TET3O43151 1660 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 TMEM131LA2VDJ0 1609 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 CSMD3Q7Z407 3707 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 SSC5DA1L4H1 1573 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 UNC13BO14795 1591 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 GLI3P10071 1580 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 EFCAB6Q5THR3 1501 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 FAM135AQ9P2D6 1515 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 GAPVD1Q14C86 1478 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 UHRF1BP1Q6BDS2 1440 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 PLEKHG2Q9H7P9 1386 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 STARD9Q9P2P6 4700 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 LOC100653049A0A140TA62 436 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 ODF3BA8MYP8 253 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 F5H5T6 163 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 TP53I11O14683 189 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 SLC37A4O43826 429 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 CACNG3O60359 315 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 DHRS3O75911 302 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 KRT34O76011 436 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 HLA-AP01891 365 aaKnown RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 UBCP0CG48 685 aaKnown RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 HTR2CP28335 458 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 MAGEA3P43357 314 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 EMP2P54851 167 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 RPL18AQ02543 176 aaKnown RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 PRB3Q04118 309 aaPredicted RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 ST3GAL4Q11206 333 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 MERTKQ12866 999 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 SPCS2Q15005 226 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 TNXAQ16473 311 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 PYCR3Q53H96 274 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 SPIN4Q56A73 249 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 SPANXN2Q5MJ10 180 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 SLC25A25Q6KCM7 469 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 SSX9Q7RTT3 188 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 FAM122BQ7Z309 247 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 DPPA2Q7Z7J5 298 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 C2orf73Q8N5S3 287 aaPredicted RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 PQLC3Q8N755 202 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 C8orf31Q8N9H6 132 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 ACBD4Q8NC06 268 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 OR4K2Q8NGD2 314 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 CACNG8Q8WXS5 425 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 MCUR1Q96AQ8 359 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 JSRP1Q96MG2 331 aaPredicted RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 PLIN2Q99541 437 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 CHP1Q99653 195 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 CXCL16Q9H2A7 254 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 ASB7Q9H672 318 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 PXMP2Q9NR77 195 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 C20orf96Q9NUD7 363 aaPredicted RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 LINC00846Q9NV44 126 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 RBM22Q9NW64 420 aaKnown RBP eCLIP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 FAM206AQ9NX38 181 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 PRO0628Q9UI54 55 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 KLF12Q9Y4X4 402 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 ORC6Q9Y5N6 252 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 INSIG2Q9Y5U4 225 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 ZNF706Q9Y5V0 76 aaPredicted RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 DNAH9Q9NYC9 4486 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 PLECQ15149 4684 aaKnown RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 KIDINS220Q9ULH0 1771 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 LRP1Q07954 4544 aaKnown RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 LYSTQ99698 3801 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 PHLPP1O60346 1717 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 DYNC2H1Q8NCM8 4307 aaKnown RBP0.24□□□□□ -2.37
UBXN4-207ENST00000471246 KIAA0556O60303 1618 aa0.24□□□□□ -2.37
UBXN4-207ENST00000471246 MAPKBP1O60336 1514 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 KIAA0586Q9BVV6 1533 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 KIAA2026Q5HYC2 2103 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 NCOA1Q15788 1441 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 SETD5Q9C0A6 1442 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 DLG5Q8TDM6 1919 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 A0A1W2PQL4 384 aaPredicted RBP0.23□□□□□ -2.37
UBXN4-207ENST00000471246 A0A1W2PRD5 423 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 HACD1B0YJ81 288 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 DFFAO00273 331 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 TRDMT1O14717 391 aaKnown RBP0.23□□□□□ -2.37
UBXN4-207ENST00000471246 SH2D1AO60880 128 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 ZNF189O75820 626 aaPredicted RBP0.23□□□□□ -2.37
UBXN4-207ENST00000471246 GCGP01275 180 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 GZMBP10144 247 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 GTF2F2P13984 249 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 ARL2P36404 184 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 HTR2BP41595 481 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 TAS2R39P59534 338 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 ATP6V0D1P61421 351 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 PAFAH1B2P68402 229 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 SSX1Q16384 188 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 C5orf64Q2M2E5 130 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 ZNF404Q494X3 552 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 CDNFQ49AH0 187 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 TTMPQ5BVD1 217 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 ACSBG2Q5FVE4 666 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 TTC32Q5I0X7 151 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 CLLU1OSQ5K130 101 aa0.23□□□□□ -2.37
UBXN4-207ENST00000471246 THOC7Q6I9Y2 204 aaKnown RBP0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms