RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 OR1M1Q8NGA1 313 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 OR10Z1Q8NGY1 313 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 CLDND2Q8NHS1 167 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 CNIH3Q8TBE1 160 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 GPR148Q8TDV2 347 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 LRRC29Q8WV35 223 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 GTF3AQ92664 365 aaKnown RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 YIPF5Q969M3 257 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 TMEM186Q96B77 213 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 TMIGD2Q96BF3 282 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 C12orf43Q96C57 262 aaKnown RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 LGALS12Q96DT0 336 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 AMELYQ99218 206 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 CSTL1Q9H114 145 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 SLITRK2Q9H156 845 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 LPAR2Q9HBW0 351 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 VCX3AQ9NNX9 186 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 AMBNQ9NP70 447 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 ACOXLQ9NUZ1 547 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 PAK1IP1Q9NWT1 392 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 RASL12Q9NYN1 266 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 MRM2Q9UI43 246 aaKnown RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 DIMT1Q9UNQ2 313 aaKnown RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 COPS3Q9UNS2 423 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 EXOGQ9Y2C4 368 aaKnown RBP5.17□□□□□ -1.58
PTCD3-208ENST00000469585 RHBDD3Q9Y3P4 386 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 DCHS2Q6V1P9 2916 aa5.17□□□□□ -1.58
PTCD3-208ENST00000469585 TEX15Q9BXT5 2789 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 IGHV3-64DA0A0J9YX35 117 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 FUOMA2VDF0 154 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 H0YL77 283 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 MLNRO43193 412 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 ADAM20O43506 726 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 ENSAO43768 121 aaKnown RBP5.16□□□□□ -1.58
PTCD3-208ENST00000469585 RP2O75695 350 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 FSTL3O95633 263 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 ATP6V1G2O95670 118 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 ECDO95905 644 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-208ENST00000469585 IGHV2-70P01814 119 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 TTRP02766 147 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 LIPFP07098 398 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 IGHV4-31P0DP07 118 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 PIPP12273 146 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-208ENST00000469585 RAB3AP20336 220 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 GABRA2P47869 451 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 TGM4P49221 684 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 BMXP51813 675 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 MTCP1P56278 107 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 OR12D2P58182 307 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 GMFBP60983 142 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 ST3GAL4Q11206 333 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 METTL11BQ5VVY1 283 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 PRAMEF6Q5VXH4 476 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 HAGHLQ6PII5 290 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-208ENST00000469585 Q6ZR03 302 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 DNM1P46Q6ZS02 220 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 Q71RC1 249 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-208ENST00000469585 Q75L30 129 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 LRRC28Q86X40 367 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-208ENST00000469585 GCSAMQ8N6F7 178 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 DEFB108BQ8NET1 73 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 OR52I1Q8NGK6 324 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 OR2G2Q8NGZ5 317 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 OR52N1Q8NH53 320 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 ZNF420Q8TAQ5 688 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-208ENST00000469585 NANPQ8TBE9 248 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 TRMT10AQ8TBZ6 339 aaKnown RBP5.16□□□□□ -1.58
PTCD3-208ENST00000469585 OR5P3Q8WZ94 311 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 SPSB1Q96BD6 273 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 CNBD2Q96M20 576 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 C1QTNF4Q9BXJ3 329 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 ELL3Q9HB65 397 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-208ENST00000469585 PATZ1Q9HBE1 687 aaKnown RBP5.16□□□□□ -1.58
PTCD3-208ENST00000469585 RAB26Q9ULW5 256 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 KLHDC2Q9Y2U9 406 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 OR2W1Q9Y3N9 320 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 ARFGEF3Q5TH69 2177 aa5.16□□□□□ -1.58
PTCD3-208ENST00000469585 LOC105371242A0A075B767 164 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 SAA2-SAA4A0A096LPE2 208 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 J3QT63 122 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 CDIPTO14735 213 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 CLIC3O95833 236 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 IGHV2-5P01817 119 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 ISG15P05161 165 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 HSMCR30P0CW71 290 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 POU3F4P49335 361 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 AQP4P55087 323 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 WNT4P56705 351 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 ISL1P61371 349 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 ADARB1P78563 741 aaKnown RBP5.15□□□□□ -1.59
PTCD3-208ENST00000469585 LCN2P80188 198 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 ZNF85Q03923 595 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 MFGE8Q08431 387 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-208ENST00000469585 ZNF154Q13106 437 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 TRAM1Q15629 374 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 RSPO1Q2MKA7 263 aaPredicted RBP5.15□□□□□ -1.59
PTCD3-208ENST00000469585 ZNF404Q494X3 552 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 WDR38Q5JTN6 314 aa5.15□□□□□ -1.59
PTCD3-208ENST00000469585 RBM48Q5RL73 367 aaKnown RBP5.15□□□□□ -1.59
PTCD3-208ENST00000469585 CIARTQ8N365 385 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms