RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 IZUMO1RA6ND01 250 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 NCBP2LA6PVI3 153 aaKnown RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 SIRPB1O00241 398 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 MAGEB4O15481 346 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 FGF16O43320 207 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 IDH3BO43837 385 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 SOX15O60248 233 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 GADD45GO95257 159 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 HAND1O96004 215 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 OR8U8P0C7N1 319 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 BTF3P20290 206 aaKnown RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 GABRR1P24046 479 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 NFYBP25208 207 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 PPIFP30405 207 aaKnown RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 MNDAP41218 407 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 REG1BP48304 166 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 F2RL1P55085 397 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 P2RX3P56373 397 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 RPS7P62081 194 aaKnown RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 ZNF91Q05481 1191 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 MFGE8Q08431 387 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 TSPAN31Q12999 210 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 KLF10Q13118 480 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 DYRK1AQ13627 763 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 LTC4SQ16873 150 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 RNLSQ5VYX0 342 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 TMEM42Q69YG0 159 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 HEPN1Q6WQI6 88 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 LINC00322Q6ZN03 302 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 RTN4RL2Q86UN3 420 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 FTMTQ8N4E7 242 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 RNF148Q8N7C7 305 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 OR9Q2Q8NGE9 314 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 IL17DQ8TAD2 202 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 TOMM40LQ969M1 308 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 COQ2Q96H96 371 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 INTS14Q96SY0 518 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 SH3GL1Q99961 368 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 BTBD10Q9BSF8 475 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 THAP7Q9BT49 309 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 ST6GALNAC5Q9BVH7 336 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 TMED9Q9BVK6 235 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 TSSK6Q9BXA6 273 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 WFDC10AQ9H1F0 79 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 PPIL3Q9H2H8 161 aaKnown RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 VIPAS39Q9H9C1 493 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 ABCB9Q9NP78 766 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 ARMC1Q9NVT9 282 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 RBFOX1Q9NWB1 397 aaKnown RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 FAM206AQ9NX38 181 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 NKIRAS1Q9NYS0 192 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 IL20Q9NYY1 176 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 SLC7A11Q9UPY5 501 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 SIRT4Q9Y6E7 314 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-209ENST00000469511 CDH10Q9Y6N8 788 aa4.02□□□□□ -1.77
PTPN4-209ENST00000469511 DNAH11Q96DT5 4516 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 A0A087X0M5 115 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 TRAV39A0A0B4J263 110 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 A0A1B0GX30 115 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 FAM230AA0A1W2PPH8 454 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 J3QR06 171 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 TOR1AO14656 332 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 SRSF10O75494 262 aaKnown RBP4.01□□□□□ -1.77
PTPN4-209ENST00000469511 SOX14O95416 240 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 IGLV1-51P01701 117 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 IGHV3-11P01762 117 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 APOC1P02654 83 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 TTRP02766 147 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 SEMG1P04279 462 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 IFNA6P05013 189 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 CGB3P0DN86 165 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 CGB7P0DN87 165 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 ZNF20P17024 532 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 BCL3P20749 454 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 CEACAM3P40198 252 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 GNG10P50151 68 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 ZNF134P52741 427 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 PRRX1P54821 245 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 RUNX1Q01196 453 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 RIPPLY1Q0D2K3 151 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 IL24Q13007 206 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 EBI3Q14213 229 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 UBE2V2Q15819 145 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 SNCBQ16143 134 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 ZNF684Q5T5D7 378 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 PLEKHG7Q6ZR37 379 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 ZBTB49Q6ZSB9 765 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 TMEM179BQ7Z7N9 219 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 CYP4Z1Q86W10 505 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 ZNF573Q86YE8 665 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 SGPP2Q8IWX5 399 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 ADGRG5Q8IZF4 528 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 IQCF1Q8N6M8 205 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 OR6Q1Q8NGQ2 317 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 OTOSQ8NHW6 89 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 RFESDQ8TAC1 157 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 GNPDA2Q8TDQ7 276 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 CORO2AQ92828 525 aa4.01□□□□□ -1.77
PTPN4-209ENST00000469511 FAM162AQ96A26 154 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms