RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 LRP12Q9Y561 859 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 FLVCR1Q9Y5Y0 555 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF106Q9H2Y7 1883 aaKnown RBP5.19□□□□□ -1.58
SHQ1-205ENST00000468371 USP34Q70CQ2 3546 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 ADAM10O14672 748 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 PPP1R2P9O14990 202 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 CDC14BO60729 498 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 PTP4A3O75365 173 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 HOXB1P14653 301 aaPredicted RBP5.19□□□□□ -1.58
SHQ1-205ENST00000468371 CD40P25942 277 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 GPR6P46095 362 aaPredicted RBP5.19□□□□□ -1.58
SHQ1-205ENST00000468371 DSCR9P59020 149 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 EGR3Q06889 387 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 TFAP2EQ6VUC0 442 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 C17orf78Q8N4C9 275 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 OTOSQ8NHW6 89 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 KCNG3Q8TAE7 436 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 SCGB1C1Q8TD33 95 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 GLYATL2Q8WU03 294 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 MITD1Q8WV92 249 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 TAAR8Q969N4 342 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 SPTSSAQ969W0 71 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 OR8B4Q96RC9 309 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 MMP26Q9NRE1 261 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 SLC7A11Q9UPY5 501 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 TIMM10BQ9Y5J6 103 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 LAMA1P25391 3075 aa5.19□□□□□ -1.58
SHQ1-205ENST00000468371 PRSS37A4D1T9 235 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 ARPC3O15145 178 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 CLPSP04118 112 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 CD37P11049 281 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 RCC1P18754 421 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 PTGDSP41222 190 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 MECP2P51608 486 aaKnown RBP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 KLF3P57682 345 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 DAZAP2Q15038 168 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF695Q8IW36 515 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR56B1Q8NGI3 324 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR1J1Q8NGS3 322 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 TERB2Q8NHR7 220 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF385AQ96PM9 386 aaKnown RBP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 TSPAN32Q96QS1 320 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 AMELYQ99218 206 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF2Q9BSG1 426 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 GHRLQ9UBU3 117 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 TNFSF18Q9UNG2 199 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 VSIG4Q9Y279 399 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 A0A0U1RQK1 487 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 C5orf49A4QMS7 147 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 HSPB6O14558 160 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 EIF3GO75821 320 aaKnown RBP eCLIP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR2A4O95047 310 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 IFNA5P01569 189 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR4A8P0C604 315 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 F2RL1P55085 397 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 MOGAT2Q3SYC2 334 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 RNF212Q495C1 297 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF611Q8N823 705 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF485Q8NCK3 441 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR52N4Q8NGI2 321 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR10D4PQ8NGN7 298 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR6S1Q8NH40 331 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR2A7Q96R45 310 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 NICN1Q9BSH3 213 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR10A2Q9H208 303 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 UNKLQ9H9P5 680 aaKnown RBP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 B9A039 149 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 PHF1O43189 567 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 TGFAP01135 160 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 MUC1P15941 1255 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 CTLA4P16410 223 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 TNFRSF1AP19438 455 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 MFGE8Q08431 387 aaPredicted RBP5.18□□□□□ -1.58
SHQ1-205ENST00000468371 ALKBH6Q3KRA9 238 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 TMEM123Q8N131 208 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 PRR18Q8N4B5 295 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR2G3Q8NGZ4 309 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OR51F2Q8NH61 342 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 POC1BQ8TC44 478 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 HPSE2Q8WWQ2 592 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 C18orf12Q96KH6 178 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 SYT3Q9BQG1 590 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 OCSTAMPQ9BR26 566 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 SUCNR1Q9BXA5 334 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 TOLLIPQ9H0E2 274 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 CNTD2Q9H8S5 307 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 CBLN4Q9NTU7 201 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 FREM3P0C091 2139 aa5.18□□□□□ -1.58
SHQ1-205ENST00000468371 A0A1W2PPE2 198 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 SMCO3A2RU48 225 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ZFP92A6NM28 416 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF705FA8MVS1 300 aaPredicted RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 LINC00587B1AMM8 73 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 PHOX2AO14813 284 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 JTBO76095 146 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 SCAF4O95104 1147 aaKnown RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 DBHP09172 617 aa5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF705DP0CH99 300 aaPredicted RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 ZNF705BP0CI00 300 aaPredicted RBP5.17□□□□□ -1.58
SHQ1-205ENST00000468371 CX3CR1P49238 355 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms