RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 IGHV3-43DP0DP04 118 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 SLC25A53Q5H9E4 307 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 ZNF787Q6DD87 383 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 MS4A3Q96HJ5 214 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 SAP30LQ9HAJ7 183 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 RPH3ALQ9UNE2 315 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 CENPFP49454 3210 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 RAMP1O60894 148 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 FADS6Q8N9I5 356 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 CMTM2Q8TAZ6 248 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 NKX6-2Q9C056 277 aaPredicted RBP11.99□□□□□ -0.49
BRAT1-203ENST00000467558 TMEM231Q9H6L2 316 aa11.99□□□□□ -0.49
BRAT1-203ENST00000467558 ZIC3O60481 467 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 GNG10P50151 68 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 HLA-DRB3P79483 266 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 OR4A4PQ8NGN8 299 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 TMEM54Q969K7 222 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 PRDM14Q9GZV8 571 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 RAB1BQ9H0U4 201 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 NTN3O00634 580 aaPredicted RBP11.98□□□□□ -0.49
BRAT1-203ENST00000467558 PMELP40967 661 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 FGF12P61328 243 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 FNDC7Q5VTL7 733 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 IL34Q6ZMJ4 242 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 TMEM123Q8N131 208 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 COMMD1Q8N668 190 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 C15orf54Q8N8G6 183 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 OR1K1Q8NGR3 316 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 ADTRPQ96IZ2 230 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 GHITMQ9H3K2 345 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 ZNF703Q9H7S9 590 aaPredicted RBP11.98□□□□□ -0.49
BRAT1-203ENST00000467558 RTTNQ86VV8 2226 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 RRASP10301 218 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 GAPTQ8N292 157 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 ZNF441Q8N8Z8 693 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 OR4D10Q8NGI6 311 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 OR5C1Q8NGR4 320 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 RAB1CQ92928 201 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 SIGLEC12Q96PQ1 595 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 ZNF251Q9BRH9 671 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 UQCC1Q9NVA1 299 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 ATPIF1Q9UII2 106 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 OR2W1Q9Y3N9 320 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 PI4KAP42356 2102 aa11.98□□□□□ -0.49
BRAT1-203ENST00000467558 OR2B8PP59922 312 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 ZNF362Q5T0B9 420 aaPredicted RBP11.97□□□□□ -0.49
BRAT1-203ENST00000467558 TIMP4Q99727 224 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 GP6Q9HCN6 339 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 RALGAPA1Q6GYQ0 2036 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 TMPRSS2O15393 492 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 PPIHO43447 177 aaKnown RBP11.97□□□□□ -0.49
BRAT1-203ENST00000467558 LYPD3O95274 346 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 SNAI3Q3KNW1 292 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 MOB3BQ86TA1 216 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 FDCSPQ8NFU4 85 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 ZNRF4Q8WWF5 429 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 AKR1E2Q96JD6 320 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 GUCD1Q96NT3 240 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 LINC00470Q9BZP3 86 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 CCL28Q9NRJ3 127 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 CA10Q9NS85 328 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 FCGR3AP08637 254 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 SFTPCP11686 197 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 KIR2DS2P43631 304 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 AANATQ16613 207 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 MOGAT2Q3SYC2 334 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 AVPI1Q5T686 147 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 STUMQ69YW2 141 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 FAM122CQ6P4D5 195 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 OR10Z1Q8NGY1 313 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 TMEM56Q96MV1 263 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 HDHD3Q9BSH5 251 aaPredicted RBP11.97□□□□□ -0.49
BRAT1-203ENST00000467558 WNT5BQ9H1J7 359 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 C19orf12Q9NSK7 152 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 SHISA3A0PJX4 238 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 ZNF727A8MUV8 499 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 FGF7P21781 194 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 RHOFQ9HBH0 211 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 FBXL17Q9UF56 701 aa11.97□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A10PA6NDY2 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A18PA6NE21 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A16PA6NEW6 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM24AA6NFZ4 105 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A20PA6NIJ5 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A8PA6NJQ4 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A7PA6NKC0 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A22PA8MWA6 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A12PA8MX19 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A5PA8MXJ8 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A23PA8MXZ1 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 NPIPB7O75200 414 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 CDS2O95674 445 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A15PP0C7V4 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A13PP0C7W8 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A14PP0C7W9 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 FAM90A24PP0C7X0 464 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 CBR1P16152 277 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 USF2Q15853 346 aaPredicted RBP11.96□□□□□ -0.49
BRAT1-203ENST00000467558 C9orf152Q5JTZ5 239 aa11.96□□□□□ -0.49
BRAT1-203ENST00000467558 HIST2H3AQ71DI3 136 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms