RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 ACY3Q96HD9 319 aa13.44□□□□□ -0.26
CHD1L-205ENST00000467213 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
CHD1L-205ENST00000467213 GPR173Q9NS66 373 aa13.44□□□□□ -0.26
CHD1L-205ENST00000467213 RALGAPA1Q6GYQ0 2036 aa13.44□□□□□ -0.26
CHD1L-205ENST00000467213 IGHV1OR21-1A0A087WYE8 117 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 SHISA8B8ZZ34 492 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 CD63P08962 238 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 OR10A7Q8NGE5 316 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 BORCS8Q96FH0 119 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 RHOVQ96L33 236 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 UBE2J1Q9Y385 318 aaPredicted RBP13.43□□□□□ -0.26
CHD1L-205ENST00000467213 MYO7BQ6PIF6 2116 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 A0A1W2PNR3 127 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 TUSC2O75896 110 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 CTXN2P0C2S0 81 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 SERF2P84101 59 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 TRIM61Q5EBN2 209 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 RAB40CQ96S21 281 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 NEU1Q99519 415 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 ARID1BQ8NFD5 2236 aaPredicted RBP13.43□□□□□ -0.26
CHD1L-205ENST00000467213 H0Y980 276 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 SSSCA1O60232 199 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 RBM11P57052 281 aaKnown RBP13.43□□□□□ -0.26
CHD1L-205ENST00000467213 TBC1D26Q86UD7 250 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 CA5BP1Q8WTZ4 195 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 RELTQ969Z4 430 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 MEGF10Q96KG7 1140 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 VAX2Q9UIW0 290 aa13.43□□□□□ -0.26
CHD1L-205ENST00000467213 DUX1O43812 170 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 ZFAND5O76080 213 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 CST2P09228 141 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 PAX9P55771 341 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 SSX2Q16385 188 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 C16orf47Q6ZP98 133 aaPredicted RBP13.42□□□□□ -0.26
CHD1L-205ENST00000467213 MRGPRGQ86SM5 289 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 IGFLR1Q9H665 355 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 METTL7AQ9H8H3 244 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 P4HTMQ9NXG6 502 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 URGCP-MRPS24S4R325 110 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 CDH23Q9H251 3354 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 A0A1B0GV50 99 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 SYNGR3O43761 229 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 IFNA5P01569 189 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 SNAI3Q3KNW1 292 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 MEX3BQ6ZN04 569 aaKnown RBP13.42□□□□□ -0.26
CHD1L-205ENST00000467213 GPR137CQ8N3F9 429 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
CHD1L-205ENST00000467213 SSX3Q99909 188 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 GPR87Q9BY21 358 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 MYOTQ9UBF9 498 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 CA14Q9ULX7 337 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 ST3GAL6Q9Y274 331 aa13.42□□□□□ -0.26
CHD1L-205ENST00000467213 IGKV1-12A0A0C4DH73 117 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 TRBV11-1A0A0K0K1C0 115 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 MED19A0JLT2 244 aaPredicted RBP13.41□□□□□ -0.26
CHD1L-205ENST00000467213 DNPH1O43598 174 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 TMEM50AO95807 157 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 IFNA1P01562 189 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 IGKV1D-12P01611 117 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 RNF224P0DH78 156 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 GZMBP10144 247 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 EPHA1P21709 976 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 CD27P26842 260 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 CD38P28907 300 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 HNRNPKP61978 463 aaKnown RBP eCLIP13.41□□□□□ -0.267e-7■■■□□ 18.3
CHD1L-205ENST00000467213 MPV17LQ2QL34 196 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 TCEAL6Q6IPX3 200 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 PRSS58Q8IYP2 241 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 TPSD1Q9BZJ3 242 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 PPP1R14DQ9NXH3 145 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 F5P12259 2224 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 TOX3O15405 576 aaPredicted RBP13.41□□□□□ -0.26
CHD1L-205ENST00000467213 ADAM20O43506 726 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 SPRY1O43609 319 aaPredicted RBP13.41□□□□□ -0.26
CHD1L-205ENST00000467213 ANGPTL7O43827 346 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 NRASP01111 189 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 PFN1P07737 140 aaKnown RBP13.41□□□□□ -0.26
CHD1L-205ENST00000467213 CLDN15P56746 228 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 CXorf66Q5JRM2 361 aaPredicted RBP13.41□□□□□ -0.26
CHD1L-205ENST00000467213 WDR74Q6RFH5 385 aaPredicted RBP13.41□□□□□ -0.26
CHD1L-205ENST00000467213 Q6ZPA2 131 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 C20orf196Q8IYI0 205 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 SAXO1Q8IYX7 474 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 PINX1Q96BK5 328 aaKnown RBP13.41□□□□□ -0.26
CHD1L-205ENST00000467213 LURAP1Q96LR2 239 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 CABLES2Q9BTV7 478 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 PCED1AQ9H1Q7 454 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 PLEK2Q9NYT0 353 aa13.41□□□□□ -0.26
CHD1L-205ENST00000467213 BTF3P20290 206 aaKnown RBP13.4□□□□□ -0.26
CHD1L-205ENST00000467213 CFHR1Q03591 330 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 PRDX4Q13162 271 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 PHYHD1Q5SRE7 291 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 MRPL52Q86TS9 123 aaKnown RBP13.4□□□□□ -0.26
CHD1L-205ENST00000467213 OR1P1Q8NH06 330 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 OR4X1Q8NH49 305 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 RYDENQ9NUL5 291 aaKnown RBP13.4□□□□□ -0.26
CHD1L-205ENST00000467213 CHD9Q3L8U1 2897 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 OR6C6A6NF89 314 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 NPIPA2E9PIF3 369 aa13.4□□□□□ -0.26
CHD1L-205ENST00000467213 LINC01565O15544 149 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms