RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 GAPTQ8N292 157 aa12.57□□□□□ -0.4
NPHP4-205ENST00000466897 SAMD12Q8N8I0 201 aa12.57□□□□□ -0.4
NPHP4-205ENST00000466897 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
NPHP4-205ENST00000466897 CHST6Q9GZX3 395 aa12.57□□□□□ -0.4
NPHP4-205ENST00000466897 ATG5Q9H1Y0 275 aa12.57□□□□□ -0.4
NPHP4-205ENST00000466897 ARHGAP32A7KAX9 2087 aa12.57□□□□□ -0.4
NPHP4-205ENST00000466897 IGHV2-70DA0A0C4DH43 119 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 POM121CA8CG34 1229 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 C22orf46C9J442 243 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 MFNGO00587 321 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 ENSAO43768 121 aaKnown RBP12.56□□□□□ -0.4
NPHP4-205ENST00000466897 LIPFP07098 398 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 DVL1P1P54792 670 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-205ENST00000466897 LCN2P80188 198 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 MOGAT2Q3SYC2 334 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 PLAC9Q5JTB6 97 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 RSBN1Q5VWQ0 802 aaPredicted RBP12.56□□□□□ -0.4
NPHP4-205ENST00000466897 CYB5R2Q6BCY4 276 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 SLC35E4Q6ICL7 350 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 Q6ZTK2 550 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 FGFRL1Q8N441 504 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 PHF21AQ96BD5 680 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 MSI2Q96DH6 328 aaKnown RBP12.56□□□□□ -0.4
NPHP4-205ENST00000466897 RAB3CQ96E17 227 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 S100A16Q96FQ6 103 aaKnown RBP12.56□□□□□ -0.4
NPHP4-205ENST00000466897 COQ2Q96H96 371 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 DCUN1D5Q9BTE7 237 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 PLEKHJ1Q9NW61 149 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 COMMD3Q9UBI1 195 aa12.56□□□□□ -0.4
NPHP4-205ENST00000466897 KIR2DS1A0A191URI9 304 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 SERPINE3A8MV23 424 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 HSPB6O14558 160 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 TPPPO94811 219 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 INHBBP09529 407 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 CD99P14209 185 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 HIST1H1DP16402 221 aaKnown RBP12.55□□□□□ -0.4
NPHP4-205ENST00000466897 RPL31P62899 125 aaKnown RBP12.55□□□□□ -0.4
NPHP4-205ENST00000466897 ATXN7L3Q14CW9 347 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-205ENST00000466897 KRBOX4Q5JUW0 171 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 NKAPLQ5M9Q1 402 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 ZNF497Q6ZNH5 498 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 C6orf201Q7Z4U5 140 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 GLCCI1Q86VQ1 547 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 CMTM4Q8IZR5 234 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 BPIFB2Q8N4F0 458 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 KIR3DL3Q8N743 410 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 MCFD2Q8NI22 146 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 CORO2AQ92828 525 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 TMEM186Q96B77 213 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 ARHGAP5-AS1Q96IT6 56 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 SULT4A1Q9BR01 284 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 PECRQ9BY49 303 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 MMP27Q9H306 513 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 RIMS4Q9H426 269 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-205ENST00000466897 DIABLOQ9NR28 239 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 LINC00312Q9Y6C7 94 aa12.55□□□□□ -0.4
NPHP4-205ENST00000466897 MED13LQ71F56 2210 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 ABCA1O95477 2261 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 A0A1W2PPH5 198 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 hADV38S2A0JD32 116 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 TMEM30CPA0ZSE6 113 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 ODAMA1E959 279 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 SMAD7O15105 426 aaKnown RBP12.54□□□□□ -0.4
NPHP4-205ENST00000466897 XRCC3O43542 346 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 CD5LO43866 347 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 HPGDSO60760 199 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 GSTP1P09211 210 aaKnown RBP12.54□□□□□ -0.4
NPHP4-205ENST00000466897 EDDM3BP56851 147 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 KRTAP1-1Q07627 177 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 AESQ08117 197 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 EDDM3AQ14507 147 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 CR1LQ2VPA4 569 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 PLPPR1Q8TBJ4 325 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 NEK7Q8TDX7 302 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 H1FXQ92522 213 aaKnown RBP12.54□□□□□ -0.4
NPHP4-205ENST00000466897 WDFY2Q96P53 400 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 C19orf12Q9NSK7 152 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 ETAA1Q9NY74 926 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 OR6C3Q9NZP0 311 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 ADAM30Q9UKF2 790 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 KCNK7Q9Y2U2 307 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 UBE2J1Q9Y385 318 aaPredicted RBP12.54□□□□□ -0.4
NPHP4-205ENST00000466897 INSIG2Q9Y5U4 225 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 ZANQ9Y493 2812 aa12.54□□□□□ -0.4
NPHP4-205ENST00000466897 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 TRBV6-6A0A0A6YYG2 114 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 A0A0G2JMP0 313 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 A0A0X1KG70 313 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 J3QLI3 93 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 NAPSAO96009 420 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 RBP4P02753 201 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 EIF4EP06730 217 aaKnown RBP12.53□□□□□ -0.4
NPHP4-205ENST00000466897 MELTFP08582 738 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 PPIAL4GP0DN37 164 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 ELK1P19419 428 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 CDK2P24941 298 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 MNDAP41218 407 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 GLIPR1P48060 266 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 PNLIPRP3Q17RR3 467 aa12.53□□□□□ -0.4
NPHP4-205ENST00000466897 ZNF260Q3ZCT1 412 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms