RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 CCDC36Q8IYA8 594 aa10.35□□□□□ -0.75
SEC61A1-203ENST00000464451 SLC38A6Q8IZM9 456 aa10.35□□□□□ -0.75
SEC61A1-203ENST00000464451 BHLHE23Q8NDY6 225 aa10.35□□□□□ -0.75
SEC61A1-203ENST00000464451 HPSE2Q8WWQ2 592 aa10.35□□□□□ -0.75
SEC61A1-203ENST00000464451 RTN4IP1Q8WWV3 396 aaPredicted RBP10.35□□□□□ -0.75
SEC61A1-203ENST00000464451 MARS2Q96GW9 593 aaKnown RBP10.35□□□□□ -0.75
SEC61A1-203ENST00000464451 VKORC1Q9BQB6 163 aa10.35□□□□□ -0.75
SEC61A1-203ENST00000464451 NAA60Q9H7X0 242 aa10.35□□□□□ -0.75
SEC61A1-203ENST00000464451 GP6Q9HCN6 339 aa10.35□□□□□ -0.75
SEC61A1-203ENST00000464451 GLS2Q9UI32 602 aa10.35□□□□□ -0.75
SEC61A1-203ENST00000464451 MSGN1A6NI15 193 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 TAAR5O14804 337 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 BCL3P20749 454 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 FGF12P61328 243 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 DAZAP2Q15038 168 aaPredicted RBP10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 CDSNQ15517 529 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 SRSF7Q16629 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 Q6ZS49 121 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 MKXQ8IYA7 352 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 OR5A2Q8NGI9 324 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 MOB3AQ96BX8 217 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 HIST1H2AAQ96QV6 131 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 SYT3Q9BQG1 590 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 SUCNR1Q9BXA5 334 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 PIGMQ9H3S5 423 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 SPEF1Q9Y4P9 236 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 FASNP49327 2511 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 A1L4Q6 167 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 ZNF732B4DXR9 585 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 FGF16O43320 207 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 NGFP01138 241 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 HOXD4P09016 255 aaPredicted RBP10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 APLNRP35414 380 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 FXYD4P59646 89 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 EIF5AP63241 154 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 TMEM187Q14656 261 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 SMCO1Q147U7 214 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 PDCD1Q15116 288 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 FBXW9Q5XUX1 488 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 GGNBP1Q5YKI7 109 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 MRGPRGQ86SM5 289 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 LRTM2Q8N967 370 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 OR1K1Q8NGR3 316 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 RNF141Q8WVD5 230 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 NANOS1Q8WY41 292 aaKnown RBP10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 SLAMF9Q96A28 289 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 SLC5A7Q9GZV3 580 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 FGF23Q9GZV9 251 aaPredicted RBP10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 SLC2A9Q9NRM0 540 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 TMEM100Q9NV29 134 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 PRSS50Q9UI38 385 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 POLEQ07864 2286 aa10.34□□□□□ -0.75
SEC61A1-203ENST00000464451 COL12A1Q99715 3063 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 A0A0G2JNJ9 132 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 CLEC18AA5D8T8 446 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 SLC22A20A6NK97 555 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 CD300LBA8K4G0 201 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 TRAPPC2LH3BP13 241 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 OR5AC1P0C628 307 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 HERV-K104P61576 105 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 MPV17LQ2QL34 196 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 UQCC3Q6UW78 93 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 TFAP2EQ6VUC0 442 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 CCDC71LQ8N9Z2 235 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 C9orf106Q8NAJ2 232 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 CLEC18CQ8NCF0 446 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 OR5L1Q8NGL2 311 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 RND1Q92730 232 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 MARC2Q969Z3 335 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 Q9UFV3 132 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 ZNF175Q9Y473 711 aa10.33□□□□□ -0.76
SEC61A1-203ENST00000464451 RAB19A4D1S5 217 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 ANKRD30BLA7E2S9 258 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 DEDDO75618 318 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 ZNF205O95201 554 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 IL18BPO95998 194 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 HKR1P10072 659 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 HIKESHIQ53FT3 197 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 Q6ZPA2 131 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 P4HA3Q7Z4N8 544 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 GCNT2Q8N0V5 402 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 STPG2Q8N412 459 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 ITLN2Q8WWU7 325 aaPredicted RBP10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 OR5P3Q8WZ94 311 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 BCL2L2Q92843 193 aaPredicted RBP10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 MRPL24Q96A35 216 aaKnown RBP10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 RSRP1Q9BUV0 290 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 PLK3Q9H4B4 646 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 C12orf49Q9H741 205 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 MTCH1Q9NZJ7 389 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 CRIM1Q9NZV1 1036 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 RCC2Q9P258 522 aaKnown RBP10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 ZNF629Q9UEG4 869 aaPredicted RBP10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 PCDHB10Q9UN67 800 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 MPC1Q9Y5U8 109 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 HIVEP3Q5T1R4 2406 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 OR5B21A6NL26 309 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 NUDT19A8MXV4 375 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 K7EPK0 472 aa10.32□□□□□ -0.76
SEC61A1-203ENST00000464451 PPYP01298 95 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms