RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 FMODQ06828 376 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 BSPH1Q075Z2 132 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 HNRNPA0Q13151 305 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 GINS1Q14691 196 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 TRAM1Q15629 374 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 GABRA6Q16445 453 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 HIST3H3Q16695 136 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 HIKESHIQ53FT3 197 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 MESTQ5EB52 335 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 FAM74A1Q5RGS3 127 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 TIMM23BQ5SRD1 257 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 C11orf71Q6IPW1 123 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 LEG1Q6P5S2 330 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 CNIH2Q6PI25 160 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 DNM1P34Q6PK57 102 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 ZNF813Q6ZN06 617 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 SSX8Q7RTT4 187 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 LRRC28Q86X40 367 aaPredicted RBP5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 LDLRAD3Q86YD5 345 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 FAM185AQ8N0U4 392 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 Q8N402 240 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 C17orf78Q8N4C9 275 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 IQCF1Q8N6M8 205 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 TMEM104Q8NE00 496 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 SDR9C7Q8NEX9 313 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 NUDT10Q8NFP7 164 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 OR1K1Q8NGR3 316 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 OR4Q3Q8NH05 313 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 OR52N5Q8NH56 324 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 OR1S1Q8NH92 325 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 RXFP4Q8TDU9 374 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 HSD17B8Q92506 261 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 NEIL1Q96FI4 390 aaPredicted RBP5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 FAM210BQ96KR6 192 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 CXorf58Q96LI9 332 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 NMNAT3Q96T66 252 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 S100A13Q99584 98 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 ATF6BQ99941 703 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 SEC11CQ9BY50 192 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 COMMD4Q9H0A8 199 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 OR10A4Q9H209 315 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 SYT4Q9H2B2 425 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 DPAGT1Q9H3H5 408 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 PRDM13Q9H4Q3 707 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 SEC61A2Q9H9S3 476 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 CYSLTR2Q9NS75 346 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 CBLN4Q9NTU7 201 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 TMEM38BQ9NVV0 291 aa5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 GAR1Q9NY12 217 aaKnown RBP5.1□□□□□ -1.59
SMARCC1-204ENST00000462198 MEX3AA1L020 520 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 LRP5LA4QPB2 252 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 OR6C68A6NDL8 312 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 PGPEP1LA6NFU8 196 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 CBY3A6NI87 242 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 SHISA9B4DS77 424 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 SEC14L6B5MCN3 397 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 G3V3Q6 166 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 SMLR1H3BR10 107 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 H7C417 338 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 M0R143 59 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 SLC16A7O60669 478 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 SCAF4O95104 1147 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 CFDP00746 253 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 HLA-DQA2P01906 255 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 TK1P04183 234 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 IFNA6P05013 189 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 CTLA4P16410 223 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 ZNF25P17030 456 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 FGF7P21781 194 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 CDAP32320 146 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 CDKN2AP42771 156 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 CDX1P47902 265 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 ZNF83P51522 516 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 ZNF133P52736 654 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 WNT4P56705 351 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 GMFBP60983 142 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 CDK5Q00535 292 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 SCGB2A2Q13296 93 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 GPR176Q14439 515 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 C10orf128Q5T292 105 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 LPCAT3Q6P1A2 487 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 SLC25A47Q6Q0C1 308 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 PUSL1Q8N0Z8 303 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 LRRC18Q8N456 261 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 SLC22A24Q8N4F4 322 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 SPICQ8N5J4 248 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 LINC01356Q8N9X3 169 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 CCDC54Q8NEL0 328 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 BPIFCQ8NFQ6 507 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 OR11H7Q8NGC8 314 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 OR11H4Q8NGC9 324 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 OR52I1Q8NGK6 324 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 ACOT12Q8WYK0 555 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 THRSPQ92748 146 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 BCL2L2Q92843 193 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 ZNF649Q9BS31 505 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 PIMREGQ9BSJ6 248 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 C1QTNF6Q9BXI9 259 aa5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 EXOSC4Q9NPD3 245 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-204ENST00000462198 SLC17A5Q9NRA2 495 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms