RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RPS11P62280 158 aaKnown RBP eCLIP1.77□□□□□ -2.13
VCL-203ENST00000461383 ENDOGQ14249 297 aaKnown RBP1.77□□□□□ -2.13
VCL-203ENST00000461383 TMEM69Q5SWH9 247 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 ZFAND6Q6FIF0 208 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 GLYATQ6IB77 296 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 CLEC18BQ6UXF7 455 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 ZFP62Q8NB50 900 aaPredicted RBP1.77□□□□□ -2.13
VCL-203ENST00000461383 OR5AK3PQ8NH89 298 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 RNASEH2CQ8TDP1 164 aaKnown RBP1.77□□□□□ -2.13
VCL-203ENST00000461383 DTD1Q8TEA8 209 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 OTUB2Q96DC9 234 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 ZNF251Q9BRH9 671 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 PLA2G12AQ9BZM1 189 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 RHOFQ9HBH0 211 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 ASCL3Q9NQ33 180 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 C1orf109Q9NX04 203 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 FBXL3Q9UKT7 428 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 BTRCQ9Y297 605 aa1.77□□□□□ -2.13
VCL-203ENST00000461383 ZNF638Q14966 1978 aaKnown RBP1.77□□□□□ -2.13
VCL-203ENST00000461383 IGHV2-26A0A0B4J1V2 119 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 F5H5P2 479 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 TOR1AO14656 332 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 LIN7AO14910 233 aaPredicted RBP1.76□□□□□ -2.13
VCL-203ENST00000461383 CALUO43852 315 aaPredicted RBP1.76□□□□□ -2.13
VCL-203ENST00000461383 NDUFS6O75380 124 aaKnown RBP1.76□□□□□ -2.13
VCL-203ENST00000461383 PSIP1O75475 530 aaKnown RBP1.76□□□□□ -2.13
VCL-203ENST00000461383 RAB36O95755 333 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 TPM3P06753 285 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 GP1BAP07359 652 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 OCMP0CE72 109 aaPredicted RBP1.76□□□□□ -2.13
VCL-203ENST00000461383 LIMS3P0CW19 117 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 LIMS4P0CW20 117 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 ZNF3P17036 446 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 PRPS1L1P21108 318 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 SKP1P63208 163 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 TPM4P67936 248 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 IL15RAQ13261 267 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 FAM53BQ14153 422 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 LGALSLQ3ZCW2 172 aaPredicted RBP1.76□□□□□ -2.13
VCL-203ENST00000461383 KRTAP13-2Q52LG2 175 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 TMEM136Q6ZRR5 245 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 SPATA24Q86W54 205 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 CALHM3Q86XJ0 350 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 TMEM25Q86YD3 366 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 CPNE9Q8IYJ1 553 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 BOD1L2Q8IYS8 172 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 LYPD1Q8N2G4 141 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 C1orf64Q8NEQ6 169 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 OR4C13Q8NGP0 309 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 CLDN23Q96B33 292 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 TMEM56Q96MV1 263 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 SHANK2-AS3Q9BTD1 123 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 ANGPTL4Q9BY76 406 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 BCL2L14Q9BZR8 327 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 GABARAPL1Q9H0R8 117 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 TXNIPQ9H3M7 391 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 NRBP2Q9NSY0 501 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 DMAC2Q9NW81 257 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 ICOSQ9Y6W8 199 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 SHANK1Q9Y566 2161 aa1.76□□□□□ -2.13
VCL-203ENST00000461383 ADGRL1O94910 1474 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 NOS1P29475 1434 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 KIAA0232Q92628 1395 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 IGHV3-21A0A0B4J1V1 117 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 ARGFXA6NJG6 315 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 C9J4A7 227 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 MKRN2OSH3BPM6 223 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 ISLRO14498 428 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 TCF21O43680 179 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 MPZL2O60487 215 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 SCN2BO60939 215 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 CA2P00918 260 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 IGHG2P01859 326 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 TRGV3P03979 118 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 F8A1P23610 371 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 CRABP2P29373 138 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 PSMD7P51665 324 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 MAP3K7CLP57077 242 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 KLF3P57682 345 aaPredicted RBP1.75□□□□□ -2.13
VCL-203ENST00000461383 DYNLL1P63167 89 aaKnown RBP1.75□□□□□ -2.13
VCL-203ENST00000461383 ZNHIT3Q15649 155 aaPredicted RBP1.75□□□□□ -2.13
VCL-203ENST00000461383 ZBTB6Q15916 424 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 LDLRAD2Q5SZI1 272 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 FAM162BQ5T6X4 162 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 TMEM215Q68D42 235 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 ELP2Q6IA86 826 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 TTC33Q6PID6 262 aaPredicted RBP1.75□□□□□ -2.13
VCL-203ENST00000461383 SLC13A5Q86YT5 568 aaPredicted RBP1.75□□□□□ -2.13
VCL-203ENST00000461383 SLC25A45Q8N413 288 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 OR2M3Q8NG83 312 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 OR7G1Q8NGA0 311 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 DYNC2LI1Q8TCX1 351 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 ZNF721Q8TF20 911 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 OR2V2Q96R30 315 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 C7orf50Q9BRJ6 194 aaKnown RBP1.75□□□□□ -2.13
VCL-203ENST00000461383 DCUN1D5Q9BTE7 237 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 TAS2R1Q9NYW7 299 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 SHROOM3Q8TF72 1996 aa1.75□□□□□ -2.13
VCL-203ENST00000461383 CHD2O14647 1828 aaKnown RBP1.75□□□□□ -2.13
VCL-203ENST00000461383 TMEM94Q12767 1356 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms