RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 RNF114Q9Y508 228 aa12.5□□□□□ -0.41
VARS-219ENST00000461328 ZNF780AO75290 641 aaPredicted RBP12.49□□□□□ -0.41
VARS-219ENST00000461328 GPX5O75715 221 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 PAX6P26367 422 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 RBM11P57052 281 aaKnown RBP12.49□□□□□ -0.41
VARS-219ENST00000461328 SRSF4Q08170 494 aaKnown RBP12.49□□□□□ -0.41
VARS-219ENST00000461328 LY6EQ16553 131 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 BRICD5Q6PL45 260 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 ASCL4Q6XD76 172 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 LHFPL4Q7Z7J7 247 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 MS4A15Q8N5U1 240 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 NKAIN3Q8N8D7 197 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 OR4D6Q8NGJ1 314 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 OR51T1Q8NGJ9 327 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 LINC01006Q8NI28 216 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 NDNFQ8TB73 568 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 NEK7Q8TDX7 302 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 COQ2Q96H96 371 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 CLEC7AQ9BXN2 247 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 PPIL3Q9H2H8 161 aaKnown RBP12.49□□□□□ -0.41
VARS-219ENST00000461328 TMEM133Q9H2Q1 129 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 TCF7L1Q9HCS4 588 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 OR6C3Q9NZP0 311 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 BLOC1S6Q9UL45 172 aa12.49□□□□□ -0.41
VARS-219ENST00000461328 LSM2Q9Y333 95 aaKnown RBP12.49□□□□□ -0.41
VARS-219ENST00000461328 TBL2Q9Y4P3 447 aaKnown RBP12.49□□□□□ -0.41
VARS-219ENST00000461328 MEIKINA0A087WXM9 373 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 IGHV2-26A0A0B4J1V2 119 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 FAM172BPA6NC97 362 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 ODF3BA8MYP8 253 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 GTF2F2P13984 249 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 CRHBPP24387 322 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 CDK2P24941 298 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 VHLP40337 213 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 GPR176Q14439 515 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 FAM189A2Q15884 450 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 ACSM3Q53FZ2 586 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 RBM48Q5RL73 367 aaKnown RBP12.48□□□□□ -0.41
VARS-219ENST00000461328 ATAD3CQ5T2N8 411 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 ZNF626Q68DY1 528 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 OR52W1Q6IF63 320 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 GLIPR1L1Q6UWM5 242 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 Q6ZSV7 163 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 LINC00596Q86U02 117 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 OR11H6Q8NGC7 330 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 DPCDQ9BVM2 203 aaPredicted RBP12.48□□□□□ -0.41
VARS-219ENST00000461328 BARHL1Q9BZE3 327 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 ABCB10Q9NRK6 738 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 TAS2R3Q9NYW6 316 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 RAB26Q9ULW5 256 aa12.48□□□□□ -0.41
VARS-219ENST00000461328 A0A1W2PP11 408 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 GEMIN2O14893 280 aaKnown RBP12.47□□□□□ -0.41
VARS-219ENST00000461328 PIN1P1O15428 100 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 MMP23AO75900 390 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 KCNJ3P48549 501 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 INSL4Q14641 139 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 IRF3Q14653 427 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 SSX2Q16385 188 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 MPV17LQ2QL34 196 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 NHLRC3Q5JS37 347 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 LIPKQ5VXJ0 399 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 HEPN1Q6WQI6 88 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 PRSS48Q7RTY5 328 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 SUMF2Q8NBJ7 301 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 Q8NFD4 153 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 CORO2AQ92828 525 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 AJUBAQ96IF1 538 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 MEGF9Q9H1U4 602 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 Q9H521 79 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 DUSP21Q9H596 190 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 KIF25Q9UIL4 384 aa12.47□□□□□ -0.41
VARS-219ENST00000461328 MEGF11A6BM72 1044 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 ZNF729A6NN14 1252 aaPredicted RBP12.46□□□□□ -0.41
VARS-219ENST00000461328 NFYBP25208 207 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 AANATQ16613 207 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 FAM27D1Q5T7N8 215 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 TREML4Q6UXN2 200 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 CEACAM19Q7Z692 300 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 CDH26Q8IXH8 852 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 ABHD12Q8N2K0 398 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 MRGPRDQ8TDS7 321 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 TMEM203Q969S6 136 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 CITED1Q99966 193 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 C16orf95Q9H693 158 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 ZNF581Q9P0T4 197 aa12.46□□□□□ -0.41
VARS-219ENST00000461328 TOR1AO14656 332 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 CRTAPO75718 401 aaPredicted RBP12.45□□□□□ -0.42
VARS-219ENST00000461328 TSPAN9O75954 239 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 MAP2K4P45985 399 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 PROK1P58294 105 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 GPR50Q13585 617 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 HSD17B12Q53GQ0 312 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 MINOS1Q5TGZ0 78 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 GLT8D1Q68CQ7 371 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 BAIAP2L2Q6UXY1 529 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 ZNF565Q8N9K5 539 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 OR13A1Q8NGR1 328 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 PLPPR1Q8TBJ4 325 aa12.45□□□□□ -0.42
VARS-219ENST00000461328 ZNF596Q8TC21 504 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms