RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 SSX1Q16384 188 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 ODF4Q2M2E3 257 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 C10orf99Q6UWK7 81 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 COMMD2Q86X83 199 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 ELMOD2Q8IZ81 293 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 GHSRQ92847 366 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 RNF166Q96A37 237 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-202ENST00000461127 TMED9Q9BVK6 235 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 ZNF319Q9P2F9 582 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 SLC22A13Q9Y226 551 aa13.71□□□□□ -0.21
TOP3A-202ENST00000461127 OR4C45A6NMZ5 311 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 NUDT19A8MXV4 375 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 NOL3O60936 208 aaKnown RBP13.7□□□□□ -0.22
TOP3A-202ENST00000461127 CD1AP06126 327 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 UBCP0CG48 685 aaKnown RBP13.7□□□□□ -0.22
TOP3A-202ENST00000461127 PGA5P0DJD9 388 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 IGHV1-8P0DP01 117 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 PSMA1P25786 263 aaKnown RBP13.7□□□□□ -0.22
TOP3A-202ENST00000461127 MYCNOSP40205 109 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 DLX6P56179 175 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 RPS25P62851 125 aaKnown RBP13.7□□□□□ -0.22
TOP3A-202ENST00000461127 TRAM1Q15629 374 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 TIMM50Q3ZCQ8 353 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 CLVS1Q8IUQ0 354 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-202ENST00000461127 OSR2Q8N2R0 312 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 AQP3Q92482 292 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 TMEM203Q969S6 136 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 YIPF6Q96EC8 236 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 PDCD1LG2Q9BQ51 273 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 SLC25A33Q9BSK2 321 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 BATF3Q9NR55 127 aa13.7□□□□□ -0.22
TOP3A-202ENST00000461127 GAR1Q9NY12 217 aaKnown RBP13.7□□□□□ -0.22
TOP3A-202ENST00000461127 PSMB11A5LHX3 300 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 CCDC160A6NGH7 325 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 SERPINA3P01011 423 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 TK1P04183 234 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 CHATP28329 748 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 BRS3P32247 399 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 ARHGDIBP52566 201 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 RPL23AP62750 156 aaKnown RBP13.69□□□□□ -0.22
TOP3A-202ENST00000461127 CEACAM21Q3KPI0 293 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 C9orf152Q5JTZ5 239 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 TMEM244Q5VVB8 128 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 GPR107Q5VW38 600 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 HAGHLQ6PII5 290 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-202ENST00000461127 MS4A15Q8N5U1 240 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 OR8B12Q8NGG6 310 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 LYZL4Q96KX0 146 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 PRR25Q96S07 402 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 FUNDC2Q9BWH2 189 aa13.69□□□□□ -0.22
TOP3A-202ENST00000461127 EXOSC4Q9NPD3 245 aaKnown RBP13.69□□□□□ -0.22
TOP3A-202ENST00000461127 LOC107986453A0A1B0GWG9 222 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 DPPA5A6NC42 116 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 OR5B21A6NL26 309 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 TTRP02766 147 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 GADD45AP24522 165 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 YIF1BQ5BJH7 314 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 CEP78Q5JTW2 689 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 C8orf86Q6ZUL3 223 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 RDH10Q8IZV5 341 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 POC1AQ8NBT0 407 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 OR5A2Q8NGI9 324 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 OR51E1Q8TCB6 317 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 TSEN15Q8WW01 171 aaKnown RBP13.68□□□□□ -0.22
TOP3A-202ENST00000461127 PGLYRP3Q96LB9 341 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 ZFP57Q9NU63 452 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 NDUFA13Q9P0J0 144 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 STUB1Q9UNE7 303 aa13.68□□□□□ -0.22
TOP3A-202ENST00000461127 A0A0U1RQV5 110 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 LOC100506127A0A0U1RQW1 187 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 SMIM31A0A1B0GVY4 71 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 H3BSH0 61 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 SYT7O43581 403 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 AIREO43918 545 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 OR2F2O95006 317 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 NXPH2O95156 264 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 MAP2K3P46734 347 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 OR2W3Q7Z3T1 314 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 GPR148Q8TDV2 347 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 ZNF714Q96N38 554 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 RCHY1Q96PM5 261 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 P2RX4Q99571 388 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 CHCHD6Q9BRQ6 235 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 OR51E2Q9H255 320 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 GPR84Q9NQS5 396 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 OR14J1Q9UGF5 321 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 HHLA2Q9UM44 414 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 SSR3Q9UNL2 185 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 DNAH7Q8WXX0 4024 aa13.67□□□□□ -0.22
TOP3A-202ENST00000461127 DNAH1Q9P2D7 4330 aa13.66□□□□□ -0.22
TOP3A-202ENST00000461127 IGHV2-26A0A0B4J1V2 119 aa13.66□□□□□ -0.22
TOP3A-202ENST00000461127 M0QZK8 103 aa13.66□□□□□ -0.22
TOP3A-202ENST00000461127 ISG15P05161 165 aa13.66□□□□□ -0.22
TOP3A-202ENST00000461127 OCM2P0CE71 109 aa13.66□□□□□ -0.22
TOP3A-202ENST00000461127 CD24P25063 80 aa13.66□□□□□ -0.22
TOP3A-202ENST00000461127 HTR1DP28221 377 aa13.66□□□□□ -0.22
TOP3A-202ENST00000461127 EDDM3BP56851 147 aa13.66□□□□□ -0.22
TOP3A-202ENST00000461127 RAB25P57735 213 aa13.66□□□□□ -0.22
TOP3A-202ENST00000461127 ANKRD13BQ86YJ7 626 aa13.66□□□□□ -0.22
TOP3A-202ENST00000461127 ASCC1Q8N9N2 400 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms