RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 Q6ZSV7 163 aa12□□□□□ -0.49
NCK1-202ENST00000460960 RTN4RL2Q86UN3 420 aa12□□□□□ -0.49
NCK1-202ENST00000460960 ASCC1Q8N9N2 400 aaKnown RBP12□□□□□ -0.49
NCK1-202ENST00000460960 PNLDC1Q8NA58 520 aaKnown RBP12□□□□□ -0.49
NCK1-202ENST00000460960 OR4S1Q8NGB4 309 aa12□□□□□ -0.49
NCK1-202ENST00000460960 OR4M1Q8NGD0 313 aa12□□□□□ -0.49
NCK1-202ENST00000460960 H1FXQ92522 213 aaKnown RBP12□□□□□ -0.49
NCK1-202ENST00000460960 FAM46BQ96A09 425 aa12□□□□□ -0.49
NCK1-202ENST00000460960 CPNE2Q96FN4 548 aaPredicted RBP12□□□□□ -0.49
NCK1-202ENST00000460960 MED30Q96HR3 178 aa12□□□□□ -0.49
NCK1-202ENST00000460960 UQCC2Q9BRT2 126 aa12□□□□□ -0.49
NCK1-202ENST00000460960 METTL9Q9H1A3 318 aa12□□□□□ -0.49
NCK1-202ENST00000460960 C19orf12Q9NSK7 152 aa12□□□□□ -0.49
NCK1-202ENST00000460960 IL36GQ9NZH8 169 aa12□□□□□ -0.49
NCK1-202ENST00000460960 RPUSD1Q9UJJ7 312 aaKnown RBP12□□□□□ -0.49
NCK1-202ENST00000460960 FAM96BQ9Y3D0 163 aa12□□□□□ -0.49
NCK1-202ENST00000460960 TRAV1-2A0A0B4J238 106 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 BTBD17A6NE02 478 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 K7N7A8 449 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 SLC22A1O15245 554 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 TK1P04183 234 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 TFAP2AP05549 437 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 LIPFP07098 398 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 MMP9P14780 707 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 GALP22466 123 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 IER3P46695 156 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 OR3A1P47881 315 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 CAPZA1P52907 286 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 RBM11P57052 281 aaKnown RBP11.99□□□□□ -0.49
NCK1-202ENST00000460960 LSM3P62310 102 aaKnown RBP11.99□□□□□ -0.49
NCK1-202ENST00000460960 ARF6P62330 175 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 QRFPP83859 136 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 FAM189A2Q15884 450 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 LRRC10Q5BKY1 277 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 SPIN3Q5JUX0 258 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 HES5Q5TA89 166 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 GLT8D1Q68CQ7 371 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 CDH26Q8IXH8 852 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 ZNF561Q8N587 486 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 TPRX1Q8N7U7 411 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 LY6G5BQ8NDX9 201 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 OR51T1Q8NGJ9 327 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 OR13F1Q8NGS4 319 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 DCTN5Q9BTE1 182 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 NAA50Q9GZZ1 169 aaKnown RBP11.99□□□□□ -0.49
NCK1-202ENST00000460960 DPAGT1Q9H3H5 408 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 SSR3Q9UNL2 185 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 KIAA2026Q5HYC2 2103 aa11.99□□□□□ -0.49
NCK1-202ENST00000460960 TRAV24A0A0B4J272 114 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 SLC33A1O00400 549 aaPredicted RBP11.98□□□□□ -0.49
NCK1-202ENST00000460960 HSPB6O14558 160 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 GEMIN2O14893 280 aaKnown RBP11.98□□□□□ -0.49
NCK1-202ENST00000460960 CHRM2P08172 466 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 VSIG8P0DPA2 414 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 GABRR1P24046 479 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 HTR2CP28335 458 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 ALDH3B2P48448 385 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 UNC119Q13432 240 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 TCF23Q7RTU1 214 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 OSR2Q8N2R0 312 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 FUNDC2Q9BWH2 189 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 MRPS26Q9BYN8 205 aaKnown RBP11.98□□□□□ -0.49
NCK1-202ENST00000460960 PPA2Q9H2U2 334 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 VCX3AQ9NNX9 186 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 ST3GAL6Q9Y274 331 aa11.98□□□□□ -0.49
NCK1-202ENST00000460960 SLC17A2O00624 439 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 SH2D1BO14796 132 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 SLC2A2P11168 524 aaPredicted RBP11.97□□□□□ -0.49
NCK1-202ENST00000460960 ZNF44P15621 663 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 MGMTP16455 207 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 MYL9P24844 172 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 LMO1P25800 156 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 SDC2P34741 201 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 ERVFRD-1P60508 538 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 EDDM3AQ14507 147 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 BEAN1Q3B7T3 259 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 Q6ZPA2 131 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 SLC16A12Q6ZSM3 486 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 LDLRAD3Q86YD5 345 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 OR8H2Q8N162 312 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 SNX22Q96L94 193 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 SIRPDQ9H106 197 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 SEBOXQ9HB31 216 aaPredicted RBP11.97□□□□□ -0.49
NCK1-202ENST00000460960 RHOFQ9HBH0 211 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 PLGRKTQ9HBL7 147 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 ING3Q9NXR8 418 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 V9GY05 133 aa11.97□□□□□ -0.49
NCK1-202ENST00000460960 A0A0A6YYD4 124 aa11.96□□□□□ -0.49
NCK1-202ENST00000460960 A0A1W2PRD5 423 aa11.96□□□□□ -0.49
NCK1-202ENST00000460960 A0A1W2PRF3 423 aa11.96□□□□□ -0.49
NCK1-202ENST00000460960 A0A1W2PRM7 423 aa11.96□□□□□ -0.49
NCK1-202ENST00000460960 DEGS1O15121 323 aa11.96□□□□□ -0.49
NCK1-202ENST00000460960 CRTAPO75718 401 aaPredicted RBP11.96□□□□□ -0.49
NCK1-202ENST00000460960 MPIG6BO95866 241 aa11.96□□□□□ -0.49
NCK1-202ENST00000460960 CSTBP04080 98 aaKnown RBP11.96□□□□□ -0.49
NCK1-202ENST00000460960 RAB3BP20337 219 aa11.96□□□□□ -0.49
NCK1-202ENST00000460960 MXD1Q05195 221 aa11.96□□□□□ -0.49
NCK1-202ENST00000460960 ZNF273Q14593 569 aa11.96□□□□□ -0.49
NCK1-202ENST00000460960 IL13RA2Q14627 380 aa11.96□□□□□ -0.49
NCK1-202ENST00000460960 ATXN7L3Q14CW9 347 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 389.3 ms