RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 SCML1Q9UN30 329 aa2.14□□□□□ -2.07
VBP1-202ENST00000460509 C14orf166Q9Y224 244 aaKnown RBP2.14□□□□□ -2.07
VBP1-202ENST00000460509 MMACHCQ9Y4U1 282 aa2.14□□□□□ -2.07
VBP1-202ENST00000460509 ZNF407Q9C0G0 2248 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 TRIOBPQ9H2D6 2365 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 IGHV3-21A0A0B4J1V1 117 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 MGAT4DA6NG13 374 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 GGTLC3B5MD39 225 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 F5H5P2 479 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 GYG2O15488 501 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 GTF2F2P13984 249 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 M6PRP20645 277 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 PRTN3P24158 256 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 DNASE1L1P49184 302 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 PLTPP55058 493 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 DSTNP60981 165 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 UBE2IP63279 158 aaKnown RBP2.13□□□□□ -2.07
VBP1-202ENST00000460509 C2orf80Q0P641 193 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 PMS2P3Q13401 168 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 GUSBP1Q15486 140 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 CLEC12AQ5QGZ9 265 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 FAHD1Q6P587 224 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 DPPA2Q7Z7J5 298 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 TMEM25Q86YD3 366 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 GAPTQ8N292 157 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 ZNF514Q96K75 400 aaPredicted RBP2.13□□□□□ -2.07
VBP1-202ENST00000460509 ZNF396Q96N95 335 aaPredicted RBP2.13□□□□□ -2.07
VBP1-202ENST00000460509 CIB1Q99828 191 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 POMKQ9H5K3 350 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 RBM12B-AS1Q9P1G2 102 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 FADS3Q9Y5Q0 445 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 PUS1Q9Y606 427 aaKnown RBP eCLIP2.13□□□□□ -2.07
VBP1-202ENST00000460509 NLRC5Q86WI3 1866 aa2.13□□□□□ -2.07
VBP1-202ENST00000460509 LRPPRCP42704 1394 aaKnown RBP2.12□□□□□ -2.07
VBP1-202ENST00000460509 SPATA31E1Q6ZUB1 1445 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 IGLV10-54A0A075B6I4 117 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 A6NED7 52 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 CD300LBA8K4G0 201 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 A8MWP4 228 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 H3BP45 60 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 GOLGA8RI6L899 631 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 TOR1AO14656 332 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 ITGB1BP1O14713 200 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 S100A6P06703 90 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 GIMD1P0DJR0 217 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 ZNF83P51522 516 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 SKP1P63208 163 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 CTAG1AP78358 180 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 CEACAM16Q2WEN9 425 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 Q499Y3 187 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 ACTL10Q5JWF8 245 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 NXNL2Q5VZ03 156 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 Q6ZQT7 251 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 FAM19A1Q7Z5A9 133 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 C10orf107Q8IVU9 208 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 BPIFB6Q8NFQ5 453 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 OR8G5Q8NG78 346 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 NELFBQ8WX92 580 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 OR5P3Q8WZ94 311 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 SERPINB11Q96P15 392 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 LINC01587Q99440 93 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 APOL4Q9BPW4 351 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 UPF3BQ9BZI7 483 aaKnown RBP2.12□□□□□ -2.07
VBP1-202ENST00000460509 NDEL1Q9GZM8 345 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 NXF2Q9GZY0 626 aaKnown RBP2.12□□□□□ -2.07
VBP1-202ENST00000460509 SLC25A31Q9H0C2 315 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 DIABLOQ9NR28 239 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 CYB5R1Q9UHQ9 305 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 URGCP-MRPS24S4R325 110 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 VWA8A3KMH1 1905 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 USP42Q9H9J4 1324 aaKnown RBP2.12□□□□□ -2.07
VBP1-202ENST00000460509 ADAMTSL3P82987 1691 aa2.12□□□□□ -2.07
VBP1-202ENST00000460509 MIA3Q5JRA6 1907 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 IGHV3-43A0A0B4J1X8 118 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 TMEM213A2RRL7 107 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 SDHAF1A6NFY7 115 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 hCG_2039718K7EN88 272 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 SGCEO43556 437 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 LDOC1O95751 146 aaPredicted RBP2.11□□□□□ -2.07
VBP1-202ENST00000460509 GP1BAP07359 652 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 SLC35E2BP0CK96 405 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 MAGEA6P43360 314 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 TPBGQ13641 420 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 TMPPEQ6ZT21 453 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 TRIB3Q96RU7 358 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 NAGKQ9UJ70 344 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 NRCAMQ92823 1304 aa2.11□□□□□ -2.07
VBP1-202ENST00000460509 POLR3AO14802 1390 aaPredicted RBP2.1□□□□□ -2.07
VBP1-202ENST00000460509 NUP153P49790 1475 aaKnown RBP2.1□□□□□ -2.07
VBP1-202ENST00000460509 A0A1B0GTI1 187 aa2.1□□□□□ -2.07
VBP1-202ENST00000460509 MYBPHLA2RUH7 354 aa2.1□□□□□ -2.07
VBP1-202ENST00000460509 SMLR1H3BR10 107 aa2.1□□□□□ -2.07
VBP1-202ENST00000460509 M0QXV9 152 aa2.1□□□□□ -2.07
VBP1-202ENST00000460509 CD8AP01732 235 aa2.1□□□□□ -2.07
VBP1-202ENST00000460509 CD40LGP29965 261 aa2.1□□□□□ -2.07
VBP1-202ENST00000460509 UBE2G2P60604 165 aa2.1□□□□□ -2.07
VBP1-202ENST00000460509 BCL2A1Q16548 175 aa2.1□□□□□ -2.07
VBP1-202ENST00000460509 CYHR1Q6ZMK1 362 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms