RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CDK1P06493 297 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 IGFBP3P17936 291 aaPredicted RBP13.03□□□□□ -0.32
COL7A1-203ENST00000459756 FSTP19883 344 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 CDK2P24941 298 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 GABRA5P31644 462 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 WNT4P56705 351 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 ATXN7L3Q14CW9 347 aaPredicted RBP13.03□□□□□ -0.32
COL7A1-203ENST00000459756 FAM189A2Q15884 450 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 PAN3Q58A45 887 aaKnown RBP13.03□□□□□ -0.32
COL7A1-203ENST00000459756 LDLRAD2Q5SZI1 272 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 PRAMEF5Q5TYX0 476 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 RTN4RL2Q86UN3 420 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 DTX3Q8N9I9 347 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 OR10K1Q8NGX5 313 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 S100A13Q99584 98 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 METTL9Q9H1A3 318 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 NCOR1P1Q9H4R4 102 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 RANBP3Q9H6Z4 567 aaPredicted RBP13.03□□□□□ -0.32
COL7A1-203ENST00000459756 ERGIC3Q9Y282 383 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 KIAA2026Q5HYC2 2103 aa13.03□□□□□ -0.32
COL7A1-203ENST00000459756 TRBV5-7A0A0A0MS05 114 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 TRAV24A0A0B4J272 114 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 ZNF729A6NN14 1252 aaPredicted RBP13.02□□□□□ -0.33
COL7A1-203ENST00000459756 HSPB6O14558 160 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 CDRT1O95170 752 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 CSTBP04080 98 aaKnown RBP13.02□□□□□ -0.33
COL7A1-203ENST00000459756 CD1AP06126 327 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 CELP19835 753 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 KIR2DS4P43632 304 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 KCNJ3P48549 501 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 DYNLT3P51808 116 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 KRTAP10-3P60369 221 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 PAX5Q02548 391 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 PIGYQ3MUY2 71 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 PLA1AQ53H76 456 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 NHLRC3Q5JS37 347 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 C11orf88Q6PI97 169 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 TREML4Q6UXN2 200 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 ABHD12Q8N2K0 398 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 NANOGP1Q8N7R0 232 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 OR4D6Q8NGJ1 314 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 NDNFQ8TB73 568 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 ZNF596Q8TC21 504 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 ORAI1Q96D31 301 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 OR14A2Q96R54 314 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 BARHL1Q9BZE3 327 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 NPFFR1Q9GZQ6 430 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 PPIL3Q9H2H8 161 aaKnown RBP13.02□□□□□ -0.33
COL7A1-203ENST00000459756 IFT22Q9H7X7 185 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 PCDHB16Q9NRJ7 776 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 ING3Q9NXR8 418 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 PITPNC1Q9UKF7 332 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 ING4Q9UNL4 249 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 TCF19Q9Y242 345 aa13.02□□□□□ -0.33
COL7A1-203ENST00000459756 TRAV8-7A0A075B6U6 113 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 TIMM23O14925 209 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 DENRO43583 198 aaKnown RBP13.01□□□□□ -0.33
COL7A1-203ENST00000459756 RGS10O43665 173 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 CHST1O43916 411 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 ZNF780AO75290 641 aaPredicted RBP13.01□□□□□ -0.33
COL7A1-203ENST00000459756 CRHBPP24387 322 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 HTR1DP28221 377 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 CD34P28906 385 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 RAB13P51153 203 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 RBM11P57052 281 aaKnown RBP13.01□□□□□ -0.33
COL7A1-203ENST00000459756 SLC35A2P78381 396 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 BDH1Q02338 343 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 RBM48Q5RL73 367 aaKnown RBP13.01□□□□□ -0.33
COL7A1-203ENST00000459756 RNLSQ5VYX0 342 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 LINC00596Q86U02 117 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 OSR2Q8N2R0 312 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 ZNF565Q8N9K5 539 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 OR4P4Q8NGL7 312 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 THRSPQ92748 146 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 NKX3-1Q99801 234 aaPredicted RBP13.01□□□□□ -0.33
COL7A1-203ENST00000459756 TCF7L1Q9HCS4 588 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 FOXJ3Q9UPW0 622 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 ST3GAL6Q9Y274 331 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 HILPDAQ9Y5L2 63 aa13.01□□□□□ -0.33
COL7A1-203ENST00000459756 MEIKINA0A087WXM9 373 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 KBTBD11-OT1A0A1B0GTJ5 212 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 A6NDX4 124 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 M0QZ24 198 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 F2RL2O00254 374 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 GPR176Q14439 515 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 CDH26Q8IXH8 852 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 OR2T6Q8NHC8 308 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 CREB3L1Q96BA8 519 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 DERL3Q96Q80 235 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 MND1Q9BWT6 205 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 DPM3Q9P2X0 92 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 KIF25Q9UIL4 384 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 BLOC1S6Q9UL45 172 aa13□□□□□ -0.33
COL7A1-203ENST00000459756 A0A087X0M5 115 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 A0A1B0GX30 115 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 A0A1W2PPK0 400 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 MAGEA13PA6NCF6 341 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 OR7C1O76099 320 aaPredicted RBP12.99□□□□□ -0.33
COL7A1-203ENST00000459756 IGLV1-47P01700 117 aa12.99□□□□□ -0.33
COL7A1-203ENST00000459756 CGB3P0DN86 165 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms