RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 GPRIN1Q7Z2K8 1008 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 MYOZ3Q8TDC0 251 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 IL23AQ9NPF7 189 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 GKN1Q9NS71 199 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 P2RY10O00398 339 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 TNFSF12O43508 249 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 NME2P1O60361 137 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 RPS11P62280 158 aaKnown RBP eCLIP4.65□□□□□ -1.67
CSMD3-204ENST00000455883 DHRS13Q6UX07 377 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 PLPP7Q8NBV4 271 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 APOBEC4Q8WW27 367 aaKnown RBP4.65□□□□□ -1.67
CSMD3-204ENST00000455883 AMBRA1Q9C0C7 1298 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 PBOV1Q9GZY1 135 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 GP6Q9HCN6 339 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 TCRBV5S1A1TA0A578 114 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF195O14628 629 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 GYPAP02724 150 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 FABP5Q01469 135 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 FAM26DQ5JW98 314 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 SLC39A5Q6ZMH5 540 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 OR5M1Q8NGP8 315 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 DEFB118Q96PH6 123 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 SMIM3Q9BZL3 60 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 TCRBV16S1A1N1A0A5B0 115 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF716A6NP11 495 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 TNFSF11O14788 317 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 ATP5LO75964 103 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 ISG15P05161 165 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 TMEM251Q8N6I4 163 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 ASB16Q96NS5 453 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 TUBD1Q9UJT1 453 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 C9orf170A2RU37 121 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 FAM90A9PA6NNJ1 464 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 PPP6CO00743 305 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF253O75346 499 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 OR2J2O76002 312 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 IGLV3-27P01718 113 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 IGHA2P01877 340 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 MUC20Q8N307 709 aaPredicted RBP4.65□□□□□ -1.67
CSMD3-204ENST00000455883 PIGTQ969N2 578 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 MS4A6EQ96DS6 147 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 CLDN16Q9Y5I7 305 aa4.65□□□□□ -1.67
CSMD3-204ENST00000455883 NRXN2Q9P2S2 1712 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 DNAJC25-GNG10A0A024R161 153 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 TRBV23-1A0A0A0MS06 115 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 IQCF3P0C7M6 154 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 NPPBP16860 134 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 GLRA1P23415 457 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 MYBPHQ13203 477 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 TEAD2Q15562 447 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 DGAT2L7PQ6IED9 249 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 OR13H1Q8NG92 308 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 BAHD1Q8TBE0 780 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SNRNP40Q96DI7 357 aaKnown RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 PDCD1LG2Q9BQ51 273 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 IL21Q9HBE4 155 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 ST20Q9HBF5 79 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 NTNG1Q9Y2I2 539 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 IGLV3-25P01717 112 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 TTRP02766 147 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SCGB1A1P11684 91 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF141Q15928 474 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF648Q5T619 568 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SDHAF4Q5VUM1 108 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 OR1F12Q8NHA8 337 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 MMP25Q9NPA2 562 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF729A6NN14 1252 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 CD160O95971 181 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 GPX4P36969 197 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SRSF9Q13242 221 aaKnown RBP eCLIP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 ACSM5Q6NUN0 579 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 OR2V1Q8NHB1 315 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 TM4SF18Q96CE8 201 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 OR5M11Q96RB7 305 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 CXCL16Q9H2A7 254 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 C11orf68Q9H3H3 251 aaKnown RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 NDUFS8O00217 210 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 ADAM20O43506 726 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 PSMB5P28074 263 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SHC1P29353 583 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 MC5RP33032 325 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 TGFBR1P36897 503 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SPANXN5Q5MJ07 72 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SCAMP4Q969E2 229 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 MOGAT1Q96PD6 335 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 GPR132Q9UNW8 380 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 PSG11Q9UQ72 335 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 SP9P0CG40 484 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 HIST1H1AQ02539 215 aaPredicted RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 PIGFQ07326 219 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 LURAP1LQ8IV03 231 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 FAM169BQ8N8A8 192 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 CA5BP1Q8WTZ4 195 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 MRPL13Q9BYD1 178 aaKnown RBP4.64□□□□□ -1.67
CSMD3-204ENST00000455883 CXorf36Q9H7Y0 433 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 OR2W1Q9Y3N9 320 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 TCRBV21S2A2A0A5A6 115 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 A8MU76 341 aa4.64□□□□□ -1.67
CSMD3-204ENST00000455883 TNFSF15O95150 251 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms