RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 LAIR2Q6ISS4 152 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 BAIAP2L2Q6UXY1 529 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 SATL1Q86VE3 508 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 C8orf59Q8N0T1 100 aaPredicted RBP9.69□□□□□ -0.86
USP40-210ENST00000454354 ABHD12Q8N2K0 398 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 KLHDC1Q8N7A1 406 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 OR13C5Q8NGS8 318 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 NDNFQ8TB73 568 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 ZNF596Q8TC21 504 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 GGHQ92820 318 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 PGLYRP3Q96LB9 341 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 PPIL3Q9H2H8 161 aaKnown RBP9.69□□□□□ -0.86
USP40-210ENST00000454354 IFT22Q9H7X7 185 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 TMEM138Q9NPI0 162 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 PLCXD1Q9NUJ7 323 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 OR6C3Q9NZP0 311 aa9.69□□□□□ -0.86
USP40-210ENST00000454354 F2RL2O00254 374 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 TSPAN15O95858 294 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 JUNBP17275 347 aaPredicted RBP9.68□□□□□ -0.86
USP40-210ENST00000454354 BDKRB2P30411 391 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 ZNF93P35789 620 aaPredicted RBP9.68□□□□□ -0.86
USP40-210ENST00000454354 OR3A4PP47883 348 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 TAS2R43P59537 309 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 PPP3R1P63098 170 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 SLC34A1Q06495 639 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 RIPK1Q13546 671 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 RSU1Q15404 277 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 HLA-DRB5Q30154 266 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 PIGYQ3MUY2 71 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 Q499Y3 187 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 PAN3Q58A45 887 aaKnown RBP9.68□□□□□ -0.86
USP40-210ENST00000454354 DDI2Q5TDH0 399 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 RSBN1Q5VWQ0 802 aaPredicted RBP9.68□□□□□ -0.86
USP40-210ENST00000454354 Q6ZTK2 550 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 LINC00596Q86U02 117 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 TMEM219Q86XT9 240 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 OR4D6Q8NGJ1 314 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 WIPF2Q8TF74 440 aaPredicted RBP9.68□□□□□ -0.86
USP40-210ENST00000454354 GHSRQ92847 366 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 NKX3-1Q99801 234 aaPredicted RBP9.68□□□□□ -0.86
USP40-210ENST00000454354 FAM192AQ9GZU8 254 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 LINC00574Q9H8X3 128 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 ZNF286AQ9HBT8 521 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 SERTAD4Q9NUC0 356 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 CHCHD3Q9NX63 227 aaKnown RBP9.68□□□□□ -0.86
USP40-210ENST00000454354 DPM3Q9P2X0 92 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 PSORS1C1Q9UIG5 152 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 HILPDAQ9Y5L2 63 aa9.68□□□□□ -0.86
USP40-210ENST00000454354 TRBV5-7A0A0A0MS05 114 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 KBTBD11-OT1A0A1B0GTJ5 212 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 KCNAB3O43448 404 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 CD1AP06126 327 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 RBM11P57052 281 aaKnown RBP9.67□□□□□ -0.86
USP40-210ENST00000454354 OSR2Q8N2R0 312 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 OR13A1Q8NGR1 328 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 OR10K1Q8NGX5 313 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 PLPPR1Q8TBJ4 325 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 CREB3L1Q96BA8 519 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 KIRREL1Q96J84 757 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 NR1H4Q96RI1 486 aaPredicted RBP9.67□□□□□ -0.86
USP40-210ENST00000454354 METTL9Q9H1A3 318 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 FKBP14Q9NWM8 211 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 KIF25Q9UIL4 384 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 FOXJ3Q9UPW0 622 aa9.67□□□□□ -0.86
USP40-210ENST00000454354 TRAV8-7A0A075B6U6 113 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 MEIKINA0A087WXM9 373 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 FAM172BPA6NC97 362 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 MAGEA13PA6NCF6 341 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 LEUTXA8MZ59 168 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 NPIPB11E5RHQ5 1161 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 LY6LH3BQJ8 138 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 BUB1B-PAK6H3BSN5 160 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 HSPB6O14558 160 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 XPNPEP2O43895 674 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 ZNF780AO75290 641 aaPredicted RBP9.66□□□□□ -0.86
USP40-210ENST00000454354 CDRT1O95170 752 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 HTR3BO95264 441 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 IL1AP01583 271 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 CEACAM3P40198 252 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 GLP1RP43220 463 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 WNT4P56705 351 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 DOC2BQ14184 412 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 MPV17LQ2QL34 196 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 C16orf82Q7Z2V1 217 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 ZFP41Q8N8Y5 198 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 ZNF565Q8N9K5 539 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 TFAP2CQ92754 450 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 ORAI1Q96D31 301 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 ZNF184Q99676 751 aaPredicted RBP9.66□□□□□ -0.86
USP40-210ENST00000454354 DPCDQ9BVM2 203 aaPredicted RBP9.66□□□□□ -0.86
USP40-210ENST00000454354 BARHL1Q9BZE3 327 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 PRSS22Q9GZN4 317 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 WNT10AQ9GZT5 417 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 VCXQ9H320 206 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 PAK1IP1Q9NWT1 392 aaPredicted RBP9.66□□□□□ -0.86
USP40-210ENST00000454354 ING3Q9NXR8 418 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 CALYQ9NYX4 217 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 CKLFQ9UBR5 152 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 ST3GAL6Q9Y274 331 aa9.66□□□□□ -0.86
USP40-210ENST00000454354 OOSP1A8MZH6 123 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms