RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 H1FXQ92522 213 aaKnown RBP7.2□□□□□ -1.26
COL28A1-205ENST00000453441 SLC25A28Q96A46 364 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 FAM3DQ96BQ1 224 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 RHOVQ96L33 236 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 Q96M66 194 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 GFI1Q99684 422 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 CENPOQ9BU64 300 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 TM2D1Q9BX74 207 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 BARHL1Q9BZE3 327 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 SELENOIQ9C0D9 397 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 LPAR2Q9HBW0 351 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 RAB9BQ9NP90 201 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 RCC2Q9P258 522 aaKnown RBP7.2□□□□□ -1.26
COL28A1-205ENST00000453441 IL36RNQ9UBH0 155 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 RAB22AQ9UL26 194 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 ETV7Q9Y603 341 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 AUP1Q9Y679 476 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 U3KQE9 123 aa7.2□□□□□ -1.26
COL28A1-205ENST00000453441 TEP1Q99973 2627 aaKnown RBP7.2□□□□□ -1.26
COL28A1-205ENST00000453441 A0A1B0GW55 424 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 A0A1W2PQ09 198 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 SHISA3A0PJX4 238 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 TMEM82A0PJX8 343 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 METTL21EPA6NDL7 271 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 C22orf46C9J442 243 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 SIRPB1O00241 398 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 SLC33A1O00400 549 aaPredicted RBP7.19□□□□□ -1.26
COL28A1-205ENST00000453441 GEMIN2O14893 280 aaKnown RBP7.19□□□□□ -1.26
COL28A1-205ENST00000453441 LDLRAD4O15165 306 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 PAX4O43316 350 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 PDCD6O75340 191 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 MPIG6BO95866 241 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DUX4L2P0CJ85 424 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DUX4L3P0CJ86 424 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DUX4L4P0CJ87 422 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DUX4L5P0CJ88 424 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DUX4L6P0CJ89 424 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DUX4L7P0CJ90 424 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 FUT3P21217 361 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DUSP1P28562 367 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 RBMXP38159 391 aaKnown RBP7.19□□□□□ -1.26
COL28A1-205ENST00000453441 OR3A1P47881 315 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 CEBPDP49716 269 aaPredicted RBP7.19□□□□□ -1.26
COL28A1-205ENST00000453441 TMBIM6P55061 237 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 SNU13P55769 128 aaKnown RBP7.19□□□□□ -1.26
COL28A1-205ENST00000453441 P2RX3P56373 397 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 QRFPP83859 136 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 SCN1BQ07699 218 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DYNC1I2Q13409 638 aaKnown RBP7.19□□□□□ -1.26
COL28A1-205ENST00000453441 PDCD1Q15116 288 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 CR1LQ2VPA4 569 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 PIGYQ3MUY2 71 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 METTL11BQ5VVY1 283 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 FAHD2BQ6P2I3 314 aaPredicted RBP7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DUX4L9Q6RFH8 374 aaPredicted RBP7.19□□□□□ -1.26
COL28A1-205ENST00000453441 C17orf107Q6ZR85 190 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 USP43Q70EL4 1123 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 WFDC3Q8IUB2 231 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 TMEM104Q8NE00 496 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 OR56B1Q8NGI3 324 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 FAHD2AQ96GK7 314 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 NEDD4LQ96PU5 975 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DPCDQ9BVM2 203 aaPredicted RBP7.19□□□□□ -1.26
COL28A1-205ENST00000453441 SHARPINQ9H0F6 387 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 OR6C3Q9NZP0 311 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 ABRACLQ9P1F3 81 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 DUX4Q9UBX2 424 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 UBE2J1Q9Y385 318 aaPredicted RBP7.19□□□□□ -1.26
COL28A1-205ENST00000453441 LINC00312Q9Y6C7 94 aa7.19□□□□□ -1.26
COL28A1-205ENST00000453441 ARHGAP32A7KAX9 2087 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 DSCAML1Q8TD84 2053 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 TRGV10A0A0A0MS01 117 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 TRAV24A0A0B4J272 114 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 ODAMA1E959 279 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 MCRIP1C9JLW8 97 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 PSPNO60542 156 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 FCN3O75636 299 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 SELLP14151 372 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 EDDM3BP56851 147 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 OR10A3P58181 314 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 UNC119Q13432 240 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 P2RY14Q15391 338 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 TAF9Q16594 264 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 C2orf76Q3KRA6 126 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 CHRFAM7AQ494W8 412 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 KRBOX4Q5JUW0 171 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 FAM120AOSQ5T036 256 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 ATAD3CQ5T2N8 411 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 HES5Q5TA89 166 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 NCR3LG1Q68D85 454 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 SLC35E4Q6ICL7 350 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 RAB12Q6IQ22 244 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 METAP1DQ6UB28 335 aaPredicted RBP7.18□□□□□ -1.26
COL28A1-205ENST00000453441 SLC16A12Q6ZSM3 486 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 FAM185AQ8N0U4 392 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 FAM89BQ8N5H3 189 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 SUMF2Q8NBJ7 301 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 OR4S1Q8NGB4 309 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 OR51D1Q8NGF3 324 aa7.18□□□□□ -1.26
COL28A1-205ENST00000453441 NANPQ8TBE9 248 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms