RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 RPEQ96AT9 228 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 COQ2Q96H96 371 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 KIRREL1Q96J84 757 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 OSBPL10Q9BXB5 764 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 NCOR1P1Q9H4R4 102 aa8.64□□□□□ -1.03
USP1-204ENST00000452143 ZMAT5Q9UDW3 170 aaKnown RBP8.64□□□□□ -1.03
USP1-204ENST00000452143 SH2D7A6NKC9 451 aaPredicted RBP8.63□□□□□ -1.03
USP1-204ENST00000452143 RPSAP08865 295 aaKnown RBP8.63□□□□□ -1.03
USP1-204ENST00000452143 HTR1AP08908 422 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 DBTP11182 482 aaKnown RBP8.63□□□□□ -1.03
USP1-204ENST00000452143 HOXD3P31249 432 aaPredicted RBP8.63□□□□□ -1.03
USP1-204ENST00000452143 RAB7AP51149 207 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 NANOS3P60323 173 aaKnown RBP8.63□□□□□ -1.03
USP1-204ENST00000452143 BNIP1Q12981 228 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 MADCAM1Q13477 382 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 C17orf58Q2M2W7 97 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 C9orf152Q5JTZ5 239 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 Q6P435 159 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 OR2W3Q7Z3T1 314 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 COMMD1Q8N668 190 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 ZNF565Q8N9K5 539 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 OR51A4Q8NGJ6 313 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 OR51T1Q8NGJ9 327 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 OR13C3Q8NGS6 347 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 CPNE2Q96FN4 548 aaPredicted RBP8.63□□□□□ -1.03
USP1-204ENST00000452143 WWC2-AS2Q96NR7 200 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 MYCBPQ99417 103 aaPredicted RBP8.63□□□□□ -1.03
USP1-204ENST00000452143 ZNF649Q9BS31 505 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 RIBC2Q9H4K1 309 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 LINC00574Q9H8X3 128 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 ZFP57Q9NU63 452 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 IMPAD1Q9NX62 359 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 AP4S1Q9Y587 144 aa8.63□□□□□ -1.03
USP1-204ENST00000452143 A0A1W2PPI3 338 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 DAPL1A0PJW8 107 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 J3QR06 171 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 J3QRE1 110 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 DEGS1O15121 323 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 SULT1B1O43704 296 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 IL1AP01583 271 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 SNRNP70P08621 437 aaKnown RBP8.62□□□□□ -1.03
USP1-204ENST00000452143 CGB3P0DN86 165 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 CGB7P0DN87 165 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 NFYBP25208 207 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 C21orf33P30042 268 aaPredicted RBP8.62□□□□□ -1.03
USP1-204ENST00000452143 POLR2IP36954 125 aaKnown RBP8.62□□□□□ -1.03
USP1-204ENST00000452143 GLP1RP43220 463 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 MTNR1BP49286 362 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 GP2P55259 537 aaKnown RBP8.62□□□□□ -1.03
USP1-204ENST00000452143 ZP1P60852 638 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 SLC35B1P78383 322 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 SCN1BQ07699 218 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 CDK5R1Q15078 307 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 SLC25A30Q5SVS4 291 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 OR8H3Q8N146 312 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 C5orf56Q8N8D9 126 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 OR10A7Q8NGE5 316 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 OR56B4Q8NH76 319 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 HAVCR2Q8TDQ0 301 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 MRPL48Q96GC5 212 aaKnown RBP8.62□□□□□ -1.03
USP1-204ENST00000452143 SPACA5Q96QH8 159 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 PPIL3Q9H2H8 161 aaKnown RBP8.62□□□□□ -1.03
USP1-204ENST00000452143 ZCCHC4Q9H5U6 513 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 CALYQ9NYX4 217 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 OAZ3Q9UMX2 235 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 MYRFQ9Y2G1 1151 aa8.62□□□□□ -1.03
USP1-204ENST00000452143 MEIKINA0A087WXM9 373 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 SNTNA6NMZ2 147 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 OR4C45A6NMZ5 311 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 SERPINE3A8MV23 424 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 H0YJX3 145 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 HCKP08631 526 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 TMEM225BP0DP42 221 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 TMEM11P17152 192 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 MYCNOSP40205 109 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 KCNJ3P48549 501 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 HES1Q14469 280 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 KISS1Q15726 138 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 PAN3Q58A45 887 aaKnown RBP8.61□□□□□ -1.03
USP1-204ENST00000452143 MEDAGQ5VYS4 303 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 ELP2Q6IA86 826 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 SLC16A12Q6ZSM3 486 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 C8orf86Q6ZUL3 223 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 AMIGO2Q86SJ2 522 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 ZNF329Q86UD4 541 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 SERPINA12Q8IW75 414 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 FOXRED2Q8IWF2 684 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 PARP16Q8N5Y8 322 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 DRAM1Q8N682 238 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 ACBD7Q8N6N7 88 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 OR5D14Q8NGL3 314 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 OR10AC1Q8NH08 325 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 RNFT2Q96EX2 444 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 PELI1Q96FA3 418 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 CENPNQ96H22 339 aaPredicted RBP8.61□□□□□ -1.03
USP1-204ENST00000452143 HRASLS5Q96KN8 279 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 P2RX4Q99571 388 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 BARHL1Q9BZE3 327 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 IDI2-AS1Q9NZ38 188 aa8.61□□□□□ -1.03
USP1-204ENST00000452143 TMEM212A6NML5 194 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms