RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	UBE2J1	Q9Y385	318 aa	Predicted RBP	6.99	□□□□□ -1.29
RFX3-209	ENST00000451859	TRAV39	A0A0B4J263	110 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	PNMA8C	A0A1B0GUJ8	204 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859		A6NDX4	124 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	VGLL3	A8MV65	326 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	SLC33A1	O00400	549 aa	Predicted RBP	6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	CDRT1	O95170	752 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	HTR3B	O95264	441 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	IGHV3-7	P01780	117 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	MT-ND2	P03891	347 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	CD2	P06729	351 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	MYL12A	P19105	171 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	HTR1D	P28221	377 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	ERP29	P30040	261 aa	Known RBP	6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	OR3A4P	P47883	348 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	MRPL28	Q13084	256 aa	Known RBP	6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	CDK5R1	Q15078	307 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	RCN1	Q15293	331 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	RSU1	Q15404	277 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	NSUN5P1	Q3KNT7	163 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	PIGY	Q3MUY2	71 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	TMPRSS11A	Q6ZMR5	421 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	SAXO1	Q8IYX7	474 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	ABHD12	Q8N2K0	398 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	PARP16	Q8N5Y8	322 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	OR4D6	Q8NGJ1	314 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	OR4P4	Q8NGL7	312 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	GPR148	Q8TDV2	347 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	COQ2	Q96H96	371 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	CDCA4	Q9BXL8	241 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	ZNF286A	Q9HBT8	521 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	FGF20	Q9NP95	211 aa	Predicted RBP	6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	CLEC2D	Q9UHP7	191 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	KIF25	Q9UIL4	384 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	PITPNC1	Q9UKF7	332 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	ING4	Q9UNL4	249 aa		6.98	□□□□□ -1.29
RFX3-209	ENST00000451859	MEIKIN	A0A087WXM9	373 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	TOR1A	O14656	332 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	FBXO24	O75426	580 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	ALX3	O95076	343 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	LALBA	P00709	142 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	CD28	P10747	220 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	SERPINA2	P20848	420 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	DCK	P27707	260 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	VDAC2	P45880	294 aa	Predicted RBP	6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	MTNR1B	P49286	362 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	PPP3R1	P63098	170 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	PDLIM3	Q53GG5	364 aa	Predicted RBP	6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	UTF1	Q5T230	341 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	DDI2	Q5TDH0	399 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	MINOS1	Q5TGZ0	78 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	OR52W1	Q6IF63	320 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	RPL22L1	Q6P5R6	122 aa	Known RBP	6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	HEPN1	Q6WQI6	88 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859		Q6ZS46	218 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	ZNF596	Q8TC21	504 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	LEAP2	Q969E1	77 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	TMEM106A	Q96A25	262 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	CPNE2	Q96FN4	548 aa	Predicted RBP	6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	RDH12	Q96NR8	316 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	PRSS22	Q9GZN4	317 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	SEBOX	Q9HB31	216 aa	Predicted RBP	6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	SERTAD4	Q9NUC0	356 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	MRPS18A	Q9NVS2	196 aa	Known RBP	6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	ZNF581	Q9P0T4	197 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	NOTCH3	Q9UM47	2321 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	DIMT1	Q9UNQ2	313 aa	Known RBP	6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	SIRT4	Q9Y6E7	314 aa	Predicted RBP	6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	MINOS1-NBL1	R4GNA1	71 aa		6.97	□□□□□ -1.29
RFX3-209	ENST00000451859	TRAV24	A0A0B4J272	114 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859		A0A1W2PPK0	400 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	IRGM	A1A4Y4	181 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	MAGEA13P	A6NCF6	341 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	SH2D7	A6NKC9	451 aa	Predicted RBP	6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	ZNF729	A6NN14	1252 aa	Predicted RBP	6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	ANKRD65	E5RJM6	399 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	LMO1	P25800	156 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	ZNF93	P35789	620 aa	Predicted RBP	6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	GNG10	P50151	68 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	BLCAP	P62952	87 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	C17orf58	Q2M2W7	97 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	CCDC58	Q4VC31	144 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	FBLN7	Q53RD9	439 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	TTC23	Q5W5X9	447 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	C11orf88	Q6PI97	169 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	DHRSX	Q8N5I4	330 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	CHST4	Q8NCG5	386 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	SETD9	Q8NE22	299 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	PXT1	Q8NFP0	134 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	OR51T1	Q8NGJ9	327 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	OR13A1	Q8NGR1	328 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	RFESD	Q8TAC1	157 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	UBALD1	Q8TB05	177 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	PLPPR1	Q8TBJ4	325 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	MRGPRD	Q8TDS7	321 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	CAPSL	Q8WWF8	208 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	SMIM19	Q96E16	107 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	TMEM80	Q96HE8	168 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	S100A13	Q99584	98 aa		6.96	□□□□□ -1.3
RFX3-209	ENST00000451859	RHOF	Q9HBH0	211 aa		6.96	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms