RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 FAM90A14PP0C7W9 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM90A24PP0C7X0 464 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 CD36P16671 472 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 GLIPR1P48060 266 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 ERVFRD-1P60508 538 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 METAP1DQ6UB28 335 aaPredicted RBP11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 USP43Q70EL4 1123 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 SUMF2Q8NBJ7 301 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 TMEM104Q8NE00 496 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 KCNG3Q8TAE7 436 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 ZDHHC16Q969W1 377 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM46BQ96A09 425 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 C1orf147Q96MC9 270 aaPredicted RBP11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 TMEM59Q9BXS4 323 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 GAL3ST2Q9H3Q3 398 aa11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 UNKLQ9H9P5 680 aaKnown RBP11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 UBE2J1Q9Y385 318 aaPredicted RBP11.5□□□□□ -0.57
GTF3C3-206ENST00000448539 ODAMA1E959 279 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 VSIG8P0DPA2 414 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 CD37P11049 281 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 ARSBP15848 533 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 RAB3BP20337 219 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 FGF9P31371 208 aaPredicted RBP11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 DLX1P56177 255 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 PRB3Q04118 309 aaPredicted RBP11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 KLRD1Q13241 179 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 RBM39Q14498 530 aaKnown RBP11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 P2RY14Q15391 338 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 SIGLECL1Q8N7X8 197 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 SPATA3Q8NHX4 192 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 COQ2Q96H96 371 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 GFI1Q99684 422 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 CHCHD6Q9BRQ6 235 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 TXNL4BQ9NX01 149 aaKnown RBP11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 OR6C3Q9NZP0 311 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM96BQ9Y3D0 163 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 MXRA5Q9NR99 2828 aa11.49□□□□□ -0.57
GTF3C3-206ENST00000448539 MEIKINA0A087WXM9 373 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 LOC100506127A0A0U1RQW1 187 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 A0A1W2PRD5 423 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 A0A1W2PRF3 423 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 A0A1W2PRM7 423 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 C17orf98A8MV24 154 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 MCRIP1C9JLW8 97 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 RNASEK-C17orf49H0YIS7 233 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 RBP4P02753 201 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 COX7A1P24310 79 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 UBE2E1P51965 193 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 TIMM50Q3ZCQ8 353 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 OR10K2Q6IF99 312 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 ZNF782Q6ZMW2 699 aaPredicted RBP11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 ZNF565Q8N9K5 539 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 OR13D1Q8NGV5 346 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 CORO2AQ92828 525 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 TNFRSF14Q92956 283 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 Q96M66 194 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 KCTD7Q96MP8 289 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 NEDD4LQ96PU5 975 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 URM1Q9BTM9 101 aaKnown RBP11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 OR51E2Q9H255 320 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 TAS2R3Q9NYW6 316 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 STEAP1Q9UHE8 339 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 PEX16Q9Y5Y5 336 aa11.48□□□□□ -0.57
GTF3C3-206ENST00000448539 TMEM30CPA0ZSE6 113 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 NPFFO15130 113 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 IGHV1-8P0DP01 117 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 FUT3P21217 361 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 GADD45AP24522 165 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 GLP1RP43220 463 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 DLX6P56179 175 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 LGALS4P56470 323 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 CLDN12P56749 244 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 HILS1P60008 231 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 RPS27AP62979 156 aaKnown RBP11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 BAMBIQ13145 260 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 DEFB112Q30KQ8 113 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 HES5Q5TA89 166 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 RSBN1Q5VWQ0 802 aaPredicted RBP11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 SLC35E4Q6ICL7 350 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 RAB12Q6IQ22 244 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 BRICD5Q6PL45 260 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 TCF23Q7RTU1 214 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 OR2W3Q7Z3T1 314 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 TPRA1Q86W33 373 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 PNKDQ8N490 385 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 C11orf42Q8N5U0 333 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 OR51D1Q8NGF3 324 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 SLC25A28Q96A46 364 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 FAM3DQ96BQ1 224 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 NCOR1P1Q9H4R4 102 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 ZNF581Q9P0T4 197 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 KIF25Q9UIL4 384 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 SOX21Q9Y651 276 aaPredicted RBP11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 SESN1Q9Y6P5 492 aa11.47□□□□□ -0.57
GTF3C3-206ENST00000448539 COL6A5A8TX70 2615 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 ATRQ13535 2644 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 SHISA3A0PJX4 238 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 MEIOCA2RUB1 952 aa11.46□□□□□ -0.57
GTF3C3-206ENST00000448539 IFITM5A6NNB3 132 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms