RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 LIN7BQ9HAP6 207 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 NDUFA13Q9P0J0 144 aa11.29□□□□□ -0.6
PDLIM2-213ENST00000448520 TMEM272A0A1B0GTI8 110 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 ZNF701M0R085 212 aaPredicted RBP11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 NXPH2O95156 264 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 CYB5AP00167 134 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 PRKACAP17612 351 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 IER3P46695 156 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 PSMD7P51665 324 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 EFNB2P52799 333 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 QRFPP83859 136 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 UNC119Q13432 240 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 DGUOKQ16854 277 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 PIGYQ3MUY2 71 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 ACP7Q6ZNF0 438 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 SLC36A1Q7Z2H8 476 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 RTN4RL2Q86UN3 420 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 OR10Z1Q8NGY1 313 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 METTL9Q9H1A3 318 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 HES4Q9HCC6 221 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 RPUSD1Q9UJJ7 312 aaKnown RBP11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 FAM96BQ9Y3D0 163 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 NOTCH1P46531 2555 aa11.28□□□□□ -0.6
PDLIM2-213ENST00000448520 A0A1B0GW55 424 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 TMEM14DPA8MWL7 114 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 LDLRAD4O15165 306 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 GPR137BO60478 399 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 NOS1APO75052 506 aaPredicted RBP11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 CRTAPO75718 401 aaPredicted RBP11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 BPNT1O95861 308 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 MPIG6BO95866 241 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 DUX4L2P0CJ85 424 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 DUX4L3P0CJ86 424 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 DUX4L4P0CJ87 422 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 DUX4L5P0CJ88 424 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 DUX4L6P0CJ89 424 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 DUX4L7P0CJ90 424 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 ARSBP15848 533 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 AMY2BP19961 511 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 RORCP51449 518 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 TAF9Q16594 264 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 DUX4L9Q6RFH8 374 aaPredicted RBP11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 CMTM4Q8IZR5 234 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 FAM58AQ8N1B3 248 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 LY6G5BQ8NDX9 201 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 LINC01006Q8NI28 216 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 ST8SIA4Q92187 359 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 S100A13Q99584 98 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 HMG20AQ9NP66 347 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 BATF3Q9NR55 127 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 IL36GQ9NZH8 169 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 DUX4Q9UBX2 424 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 VWFP04275 2813 aa11.27□□□□□ -0.61
PDLIM2-213ENST00000448520 A0A0A6YYD4 124 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 A0A0U1RQK1 487 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 IGHV4-59P01825 116 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 CSTBP04080 98 aaKnown RBP11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 ACAA1P09110 424 aaPredicted RBP11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 SELLP14151 372 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 MGMTP16455 207 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 PROK1P58294 105 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 GUCA2AQ02747 115 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 CNPY1Q3B7I2 92 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 ATPAF1Q5TC12 328 aaPredicted RBP11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 CD177Q8N6Q3 437 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 DTX3Q8N9I9 347 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 SLC25A38Q96DW6 304 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 NICN1Q9BSH3 213 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 SELENOIQ9C0D9 397 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 SLIRPQ9GZT3 109 aaKnown RBP11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 CCDC59Q9P031 241 aaKnown RBP11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 NLKQ9UBE8 527 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 DNAJB11Q9UBS4 358 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 OR14J1Q9UGF5 321 aa11.26□□□□□ -0.61
PDLIM2-213ENST00000448520 IGKV1D-17A0A075B6S4 117 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 BTBD17A6NE02 478 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 RFPL4AA6NLU0 287 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 RFPL4AL1F8VTS6 287 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 NDUFB3O43676 98 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 FBP1P09467 338 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 PSG2P11465 335 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 RBM11P57052 281 aaKnown RBP11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 MADCAM1Q13477 382 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 SMIM21Q3B7S5 101 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 LRRC10Q5BKY1 277 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 ELP2Q6IA86 826 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 VMO1Q7Z5L0 202 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 OSR2Q8N2R0 312 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 FGFRL1Q8N441 504 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 CCL13Q99616 98 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 DNTTIP1Q9H147 329 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 C16orf95Q9H693 158 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 COMMD3Q9UBI1 195 aa11.25□□□□□ -0.61
PDLIM2-213ENST00000448520 OR2AT4A6NND4 320 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 CTDSP2O14595 271 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 GEMIN2O14893 280 aaKnown RBP11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 HPGDSO60760 199 aa11.24□□□□□ -0.61
PDLIM2-213ENST00000448520 FCN3O75636 299 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms