RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SIGLEC12Q96PQ1 595 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 C1QTNF5Q9BXJ0 243 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 MIOXQ9UGB7 285 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 RFNGQ9Y644 331 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 CDRT15L2A8MXV6 281 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 H3BQ15 152 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 SSSCA1O60232 199 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 NAPSAO96009 420 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 KLK3P07288 261 aaPredicted RBP16.42■□□□□ 0.22
SDCBP-204ENST00000447182 SRP19P09132 144 aaKnown RBP16.42■□□□□ 0.22
SDCBP-204ENST00000447182 EDN3P14138 238 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 NPBWR2P48146 333 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 CLDN15P56746 228 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 VAMP2P63027 116 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 CEACAM16Q2WEN9 425 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 SLC25A26Q70HW3 274 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 ODF3L1Q8IXM7 274 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 AGBL5Q8NDL9 886 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 NAT6Q93015 286 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 PRDM14Q9GZV8 571 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 Q9N2K0 584 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 GLRX2Q9NS18 164 aa16.42■□□□□ 0.22
SDCBP-204ENST00000447182 K7ESF4 209 aa16.41■□□□□ 0.22
SDCBP-204ENST00000447182 HSD17B6O14756 317 aa16.41■□□□□ 0.22
SDCBP-204ENST00000447182 TXNL1O43396 289 aa16.41■□□□□ 0.22
SDCBP-204ENST00000447182 ADAM20O43506 726 aa16.41■□□□□ 0.22
SDCBP-204ENST00000447182 GDF9O60383 454 aa16.41■□□□□ 0.22
SDCBP-204ENST00000447182 HSPB1P04792 205 aaKnown RBP16.41■□□□□ 0.22
SDCBP-204ENST00000447182 VDAC1P21796 283 aa16.41■□□□□ 0.22
SDCBP-204ENST00000447182 UCP1P25874 307 aa16.41■□□□□ 0.22
SDCBP-204ENST00000447182 RGS19P49795 217 aa16.41■□□□□ 0.22
SDCBP-204ENST00000447182 CXorf66Q5JRM2 361 aaPredicted RBP16.41■□□□□ 0.22
SDCBP-204ENST00000447182 ZNF818PQ6ZRF7 136 aa16.41■□□□□ 0.22
SDCBP-204ENST00000447182 SGCZQ96LD1 299 aa16.41■□□□□ 0.22
SDCBP-204ENST00000447182 ZNF587BE7ETH6 402 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 TUSC2O75896 110 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 MMP7P09237 267 aaPredicted RBP16.4■□□□□ 0.22
SDCBP-204ENST00000447182 OMGP23515 440 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 MR1Q95460 341 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 RAB39BQ96DA2 213 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 GPR35Q9HC97 309 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 PI4KAP42356 2102 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 SLC34A2O95436 690 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 IGHV2-70P01814 119 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 HOXA5P20719 270 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 DYNLT3P51808 116 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 SPIN3Q5JUX0 258 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 ZNF506Q5JVG8 444 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 ZNF468Q5VIY5 522 aaPredicted RBP16.4■□□□□ 0.22
SDCBP-204ENST00000447182 CDCP2Q5VXM1 449 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 DPPA3Q6W0C5 159 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 COLCA1Q6ZS62 124 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 YRDCQ86U90 279 aaKnown RBP16.4■□□□□ 0.22
SDCBP-204ENST00000447182 SAXO1Q8IYX7 474 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 GAPTQ8N292 157 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 IL22RA2Q969J5 263 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 SLAMF9Q96A28 289 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 ADGRG7Q96K78 797 aa16.4■□□□□ 0.22
SDCBP-204ENST00000447182 RYDENQ9NUL5 291 aaKnown RBP16.4■□□□□ 0.22
SDCBP-204ENST00000447182 SLC22A20A6NK97 555 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 C9J4A7 227 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 CXCL13O43927 109 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 SCAF4O95104 1147 aaKnown RBP16.39■□□□□ 0.21
SDCBP-204ENST00000447182 TMEM50AO95807 157 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 ICAM4Q14773 271 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 IL22RA1Q8N6P7 574 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 OR2Y1Q8NGV0 311 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 PLPPR1Q8TBJ4 325 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 RBMXL1Q96E39 390 aaKnown RBP16.39■□□□□ 0.21
SDCBP-204ENST00000447182 MAGT1Q9H0U3 335 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 CXorf65A6NEN9 183 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 IGFBP4P22692 258 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 OR8G1Q15617 311 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 HAGHQ16775 308 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 NRN1LQ496H8 165 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 LIPGQ9Y5X9 500 aa16.39■□□□□ 0.21
SDCBP-204ENST00000447182 HBE1P02100 147 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 SCTP09683 121 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 ITGA3P26006 1051 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 TAGLN2P37802 199 aaKnown RBP16.38■□□□□ 0.21
SDCBP-204ENST00000447182 RPS10P46783 165 aaKnown RBP16.38■□□□□ 0.21
SDCBP-204ENST00000447182 CXCL12P48061 93 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 UBE2KP61086 200 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 FGF12P61328 243 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 KIAA0141Q14154 515 aaPredicted RBP16.38■□□□□ 0.21
SDCBP-204ENST00000447182 HERPUD1Q15011 391 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 OR5D13Q8NGL4 314 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 OR2V1Q8NHB1 315 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 SIRT7Q9NRC8 400 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 WNT16Q9UBV4 365 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 WDR87Q6ZQQ6 2873 aa16.38■□□□□ 0.21
SDCBP-204ENST00000447182 IGKV1D-13A0A0B4J2D9 117 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 KIR2DS1A0A191URI9 304 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 CST7O76096 145 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 CTXN2P0C2S0 81 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 IGKV1-13P0DP09 117 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 BCL3P20749 454 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 KIR2DS4P43632 304 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 TLE4Q04727 773 aa16.37■□□□□ 0.21
SDCBP-204ENST00000447182 IL24Q13007 206 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms