RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 ZNF181Q2M3W8 571 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 PYDC2Q56P42 97 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 KRBOX4Q5JUW0 171 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 UTF1Q5T230 341 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 ELP2Q6IA86 826 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 Q6ZPA2 131 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNF788Q6ZQV5 615 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 Q71RC1 249 aaPredicted RBP6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 BTN2A1Q7KYR7 527 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 GDPD3Q7L5L3 318 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 TRAPPC6BQ86SZ2 158 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 GVQW1Q8N7I0 195 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR6Q1Q8NGQ2 317 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 RFESDQ8TAC1 157 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 MRGPRDQ8TDS7 321 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 LEAP2Q969E1 77 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 MBD6Q96DN6 1003 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 RBMXL1Q96E39 390 aaKnown RBP6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 NEIL1Q96FI4 390 aaPredicted RBP6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 S100A16Q96FQ6 103 aaKnown RBP6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 COQ2Q96H96 371 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 ST6GALNAC5Q9BVH7 336 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 TM2D1Q9BX74 207 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 REG4Q9BYZ8 158 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 SHARPINQ9H0F6 387 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 MMP26Q9NRE1 261 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 RASL12Q9NYN1 266 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 PTTG2Q9NZH5 202 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 ONECUT1Q9UBC0 465 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 GHRLQ9UBU3 117 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 KIF25Q9UIL4 384 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 EDARQ9UNE0 448 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 TMA7Q9Y2S6 64 aaKnown RBP6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 KCNK7Q9Y2U2 307 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 ETV7Q9Y603 341 aa6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 MAP1AP78559 2803 aaPredicted RBP6.27□□□□□ -1.41
SF3A3P1-201ENST00000446317 IGHV3-43A0A0B4J1X8 118 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 A0A1W2PQ09 198 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 METTL21EPA6NDL7 271 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 FABP12A6NFH5 140 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 FOXI3A8MTJ6 420 aaPredicted RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 VWC2LB2RUY7 222 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 C22orf46C9J442 243 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 TNFRSF13BO14836 293 aaPredicted RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 SIGLEC5O15389 551 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 SSX5O60225 188 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNF737O75373 536 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 CSN2P05814 226 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 CHRM2P08172 466 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 WNT2P09544 360 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 IGHV3-43DP0DP04 118 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 HIST1H1DP16402 221 aaKnown RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 RCC1P18754 421 aaPredicted RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 RAB6AP20340 208 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 FUT3P21217 361 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 USF1P22415 310 aaPredicted RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 GIFP27352 417 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 CFHR2P36980 270 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 GNG2P59768 71 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 LMO4P61968 165 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 MRPS11P82912 194 aaKnown RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 DGCR2P98153 550 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 DCTN2Q13561 401 aaKnown RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNF273Q14593 569 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 IL13RA2Q14627 380 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 SPIN3Q5JUX0 258 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 PRAMEF5Q5TYX0 476 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 WDR25Q64LD2 544 aaPredicted RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNF782Q6ZMW2 699 aaPredicted RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNF841Q6ZN19 808 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 IL17RELQ6ZVW7 336 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 SPICQ8N5J4 248 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR56B1Q8NGI3 324 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 OR13A1Q8NGR1 328 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 ACOT12Q8WYK0 555 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 NINJ1Q92982 152 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 ABHD1Q96SE0 405 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 SSBP3Q9BWW4 388 aaPredicted RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 NXF2Q9GZY0 626 aaKnown RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 PATZ1Q9HBE1 687 aaKnown RBP6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNRD1Q9P1U0 126 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 CLN8Q9UBY8 286 aa6.26□□□□□ -1.41
SF3A3P1-201ENST00000446317 CELSR1Q9NYQ6 3014 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 IGKV1D-8A0A087WSZ0 117 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 A0A1W2PPE3 182 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 IFNL4K9M1U5 179 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 MFNGO00587 321 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 LANCL1O43813 399 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 MMP23AO75900 390 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 HLA-DQB1P01920 261 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 PAX1P15863 534 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 PAX6P26367 422 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 CFPP27918 469 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 SSTR5P35346 364 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 GDNFP39905 211 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 MNDAP41218 407 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 ARF6P62330 175 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 KLRD1Q13241 179 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 MPV17LQ2QL34 196 aa6.25□□□□□ -1.41
SF3A3P1-201ENST00000446317 ZNF260Q3ZCT1 412 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms