RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FUNDC2Q9BWH2 189 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 OCEL1Q9H607 264 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 HEXA-AS1Q9H8Q6 139 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 LIN7BQ9HAP6 207 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 RAB9BQ9NP90 201 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 OPN4Q9UHM6 478 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 RAB22AQ9UL26 194 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 UBE2J1Q9Y385 318 aaPredicted RBP11.62□□□□□ -0.55
SSBP3-208ENST00000444533 PEX16Q9Y5Y5 336 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 MTORP42345 2549 aa11.62□□□□□ -0.55
SSBP3-208ENST00000444533 MEIKINA0A087WXM9 373 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 TRAV24A0A0B4J272 114 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 TMEM30CPA0ZSE6 113 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 ODAMA1E959 279 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 TMEM127O75204 238 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 PDCD6O75340 191 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 CA11O75493 328 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 RBP4P02753 201 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 EPHA1P21709 976 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 CLDN12P56749 244 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 RIPPLY3P57055 190 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 OR10A3P58181 314 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 LSM3P62310 102 aaKnown RBP11.61□□□□□ -0.55
SSBP3-208ENST00000444533 C2orf76Q3KRA6 126 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 NKAPLQ5M9Q1 402 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 OR56B1Q8NGI3 324 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 ZNF418Q8TF45 676 aaPredicted RBP11.61□□□□□ -0.55
SSBP3-208ENST00000444533 LHX4Q969G2 390 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 PHF21AQ96BD5 680 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 C1orf147Q96MC9 270 aaPredicted RBP11.61□□□□□ -0.55
SSBP3-208ENST00000444533 SIRPDQ9H106 197 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 PLEKHJ1Q9NW61 149 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 ETAA1Q9NY74 926 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 DAPK2Q9UIK4 370 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 ARHGAP32A7KAX9 2087 aa11.61□□□□□ -0.55
SSBP3-208ENST00000444533 TMEM14DPA8MWL7 114 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 AVPP01185 164 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 PRTN3P24158 256 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 CFPP27918 469 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 BLVRBP30043 206 aaPredicted RBP11.6□□□□□ -0.55
SSBP3-208ENST00000444533 GLP1RP43220 463 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 GLIPR1P48060 266 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 MRPS15P82914 257 aaKnown RBP11.6□□□□□ -0.55
SSBP3-208ENST00000444533 OR52W1Q6IF63 320 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 OR10K2Q6IF99 312 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 SFXN4Q6P4A7 337 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 TPRX1Q8N7U7 411 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 SLC25A28Q96A46 364 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 GFI1Q99684 422 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 TM2D1Q9BX74 207 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 SUCNR1Q9BXA5 334 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 NCOR1P1Q9H4R4 102 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 SIRT7Q9NRC8 400 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 TAS2R3Q9NYW6 316 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 FBLN5Q9UBX5 448 aa11.6□□□□□ -0.55
SSBP3-208ENST00000444533 SONP18583 2426 aaKnown RBP11.6□□□□□ -0.55
SSBP3-208ENST00000444533 SMIM30A4D0T7 59 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 ZNF729A6NN14 1252 aaPredicted RBP11.59□□□□□ -0.55
SSBP3-208ENST00000444533 SCGNO76038 276 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 IL1AP01583 271 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 MMP9P14780 707 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 CCL3L1P16619 93 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 RAB6AP20340 208 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 RPL5P46777 297 aaKnown RBP11.59□□□□□ -0.55
SSBP3-208ENST00000444533 PAX5Q02548 391 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 ZNF273Q14593 569 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 IDNKQ5T6J7 187 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 GPR107Q5VW38 600 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 SLC35E4Q6ICL7 350 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 METAP1DQ6UB28 335 aaPredicted RBP11.59□□□□□ -0.55
SSBP3-208ENST00000444533 C1orf229Q6ZS94 237 aaPredicted RBP11.59□□□□□ -0.55
SSBP3-208ENST00000444533 OR13D1Q8NGV5 346 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 PTX4Q96A99 478 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 JMJD8Q96S16 334 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 TBX15Q96SF7 602 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 KIF25Q9UIL4 384 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 TRAPPC2LQ9UL33 140 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 FAM96BQ9Y3D0 163 aa11.59□□□□□ -0.55
SSBP3-208ENST00000444533 IGHV3OR16-10A0A075B7F0 116 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 IGHV1-69DA0A0B4J2H0 117 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 TMEM272A0A1B0GTI8 110 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 SHISA3A0PJX4 238 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 CLPXO76031 633 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 IGHV1-69P01742 117 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 GZMHP20718 246 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 SERPINB10P48595 397 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 LGALS4P56470 323 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 SCAND1P57086 179 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 QRFPP83859 136 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 UNC119Q13432 240 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 ARL6IP1Q15041 203 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 C6orf183Q5T699 404 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 TRAT1Q6PIZ9 186 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 BRICD5Q6PL45 260 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 ANKRD13BQ86YJ7 626 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 CORO2AQ92828 525 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 RNF167Q9H6Y7 350 aa11.58□□□□□ -0.56
SSBP3-208ENST00000444533 UNKLQ9H9P5 680 aaKnown RBP11.58□□□□□ -0.56
SSBP3-208ENST00000444533 CHMP1AQ9HD42 196 aaPredicted RBP11.58□□□□□ -0.56
SSBP3-208ENST00000444533 KCNIP1Q9NZI2 227 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms