RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 DHDHQ9UQ10 334 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 FREM1Q5H8C1 2179 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 CST2P09228 141 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 PGA4P0DJD7 388 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 PGA3P0DJD8 388 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 USF1P22415 310 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 PRSS12P56730 875 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 HIST1H3AP68431 136 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 CHRFAM7AQ494W8 412 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 VAX1Q5SQQ9 334 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 HIST2H3PS2Q5TEC6 136 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 PLCXD3Q63HM9 321 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 HIST2H3AQ71DI3 136 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 PDZD9Q8IXQ8 264 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 PPP1R1CQ8WVI7 109 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 RDH5Q92781 318 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 OCSTAMPQ9BR26 566 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 NMES1Q9C002 83 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR14J1Q9UGF5 321 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 PURGQ9UJV8 347 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 RAB22AQ9UL26 194 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 GPR132Q9UNW8 380 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 FXYD6-FXYD2A0A087WZ82 144 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 IGHV1-18A0A0C4DH31 117 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 E7EQL1 145 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 LYNX1G3V0Z9 82 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 MFNGO00587 321 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 DUS4LO95620 317 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 LYNX1P0DP58 116 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 C4BPBP20851 252 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 GRB2P62993 217 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 HGFACQ04756 655 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 FAM27BQ5VT28 67 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 BTNL3Q6UXE8 466 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 ACOT7LQ6ZUV0 252 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF546Q86UE3 836 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF525Q8N782 197 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZIC4Q8N9L1 334 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 NICN1Q9BSH3 213 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 FXYD6Q9H0Q3 95 aa6.3□□□□□ -1.4
CDC42BPA-208ENST00000442054 TEP1Q99973 2627 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 RAB19A4D1S5 217 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 KCNAB3O43448 404 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 SYT7O43581 403 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 SCGB1D2O95969 90 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 THBDP07204 575 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 RAB14P61106 215 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 PSG4Q00888 419 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 KRTAP27-1Q3LI81 207 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR52W1Q6IF63 320 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 SLC25A47Q6Q0C1 308 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 UQCC3Q6UW78 93 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 BPIFB2Q8N4F0 458 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 TEX29Q8N6K0 151 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR10AD1Q8NGE0 317 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 BORCS8Q96FH0 119 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 LYZL4Q96KX0 146 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 HHLA2Q9UM44 414 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 A0A0B4J2A0 478 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 FAM230AA0A1W2PPH8 454 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 NKX6-3A6NJ46 265 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 SPDEFO95238 335 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 CSTBP04080 98 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 CX3CR1P49238 355 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 LGALS4P56470 323 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 H3F3AP84243 136 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 TMEM95Q3KNT9 176 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 TRAPPC6BQ86SZ2 158 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 TMEM104Q8NE00 496 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 WFDC11Q8NEX6 87 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 PPP1R35Q8TAP8 253 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZMAT3Q9HA38 289 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 SHPKQ9UHJ6 478 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 MEGF11A6BM72 1044 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 MSGN1A6NI15 193 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 A6NJY4 79 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF736B4DX44 427 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 C3orf80F5H4A9 247 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 NDUFS7O75251 213 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 SOD3P08294 240 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 CA6P23280 308 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 FPR2P25090 351 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 MEF2DQ14814 521 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 ANKRD39Q53RE8 183 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 PAN3Q58A45 887 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 DHRS7BQ6IAN0 325 aaPredicted RBP6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 LDLRAD3Q86YD5 345 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF295-AS1Q8N0V1 137 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 TNFRSF19Q9NS68 423 aa6.29□□□□□ -1.4
CDC42BPA-208ENST00000442054 IGHV1-69-2A0A0G2JMI3 117 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 UBE2QL1A1L167 161 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 CCSO14618 274 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 SLC25A16P16260 332 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 TBPP20226 339 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 OTX1P32242 354 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 Q6ZPA2 131 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 LINC00518Q8N0U6 118 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 SCCPDHQ8NBX0 429 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR10K1Q8NGX5 313 aa6.28□□□□□ -1.4
CDC42BPA-208ENST00000442054 FOXRED1Q96CU9 486 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms