RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CCKARP32238 428 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 HTR2BP41595 481 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 KLF3P57682 345 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-206ENST00000441580 FXYD4P59646 89 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 RND3P61587 244 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 NKX6-1P78426 367 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-206ENST00000441580 ANKRD55Q3KP44 614 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 GAPTQ8N292 157 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 OR5T2Q8NGG2 359 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 OR10Z1Q8NGY1 313 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 PPP1R1CQ8WVI7 109 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 RDH5Q92781 318 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 RSRP1Q9BUV0 290 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 MFFQ9GZY8 342 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 ARL6Q9H0F7 186 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 SLC2A9Q9NRM0 540 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 RASL12Q9NYN1 266 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 Q9UFV3 132 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 FBXO9Q9UK97 447 aaPredicted RBP11.17□□□□□ -0.62
CPSF4-206ENST00000441580 PCDHB10Q9UN67 800 aa11.17□□□□□ -0.62
CPSF4-206ENST00000441580 SIRPB1O00241 398 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 TUSC2O75896 110 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 PTBP3O95758 552 aaKnown RBP11.16□□□□□ -0.62
CPSF4-206ENST00000441580 IFNA21P01568 189 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 IGHV3-13P01766 116 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 GRPP07492 148 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 DUSP1P28562 367 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 S100GP29377 79 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 FABP6P51161 128 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 CASP6P55212 293 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 SELENOVP59797 346 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 UBA52P62987 128 aaKnown RBP11.16□□□□□ -0.62
CPSF4-206ENST00000441580 TMUB2Q71RG4 321 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 FAM90A1Q86YD7 464 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 LRTM2Q8N967 370 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 ZNF565Q8N9K5 539 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 ZNF680Q8NEM1 530 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 NUP37Q8NFH4 326 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 PRR7Q8TB68 274 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 RTN4IP1Q8WWV3 396 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-206ENST00000441580 SNRNP40Q96DI7 357 aaKnown RBP11.16□□□□□ -0.62
CPSF4-206ENST00000441580 WDR89Q96FK6 387 aaPredicted RBP11.16□□□□□ -0.62
CPSF4-206ENST00000441580 TMEM165Q9HC07 324 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 TAAR3PQ9P1P4 343 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 TNFSF18Q9UNG2 199 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 RAXQ9Y2V3 346 aa11.16□□□□□ -0.62
CPSF4-206ENST00000441580 IGLV3-9A0A075B6K5 115 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 C13orf42A0A1B0GVH6 325 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 TMEM30CPA0ZSE6 113 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 H0YL77 283 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 C16orf97H3BN30 126 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 IFNL4K9M1U5 179 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 HS3ST1O14792 307 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 MPC2O95563 127 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 FAM87AP0C7U9 286 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 PSMB6P28072 239 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 EXOSC2Q13868 293 aaKnown RBP11.15□□□□□ -0.62
CPSF4-206ENST00000441580 TMEM108Q6UXF1 575 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 WDR82Q6UXN9 313 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 ZNF497Q6ZNH5 498 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 Q6ZR03 302 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 ZNF546Q86UE3 836 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 SLC51BQ86UW2 128 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 LGI3Q8N145 548 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 KIRREL1Q96J84 757 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 C2orf50Q96LR7 162 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 LIME1Q9H400 295 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 METTL8Q9H825 291 aaKnown RBP11.15□□□□□ -0.62
CPSF4-206ENST00000441580 RDH8Q9NYR8 311 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 JKAMPQ9P055 326 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 MBD2Q9UBB5 411 aa11.15□□□□□ -0.62
CPSF4-206ENST00000441580 TRBV6-7A0A0A0MS04 114 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 KANTRA0A1W2PQU2 76 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 hCG_1807616A0A1W2PRN6 198 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 GPR31O00270 319 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 BET1O15155 118 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 BCL2L11O43521 198 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 B3GALNT1O75752 331 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 LMO1P25800 156 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 HERPUD1Q15011 391 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 HMGN3Q15651 99 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 LRRC37A5PQ49AS3 106 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 ESCO2Q56NI9 601 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 IGSF11Q5DX21 431 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 PRAMEF6Q5VXH4 476 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 ACP7Q6ZNF0 438 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 KCNRGQ8N5I3 272 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 INO80EQ8NBZ0 244 aaPredicted RBP11.14□□□□□ -0.63
CPSF4-206ENST00000441580 RELL2Q8NC24 303 aaPredicted RBP11.14□□□□□ -0.63
CPSF4-206ENST00000441580 VKORC1Q9BQB6 163 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 SEBOXQ9HB31 216 aaPredicted RBP11.14□□□□□ -0.63
CPSF4-206ENST00000441580 MSL2Q9HCI7 577 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 ZFP57Q9NU63 452 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 ASF1BQ9NVP2 202 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 FZR1Q9UM11 496 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 APC2O95996 2303 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 ESPL1Q14674 2120 aa11.14□□□□□ -0.63
CPSF4-206ENST00000441580 DUXBA0A1W2PPF3 345 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 C1QTNF9BB2RNN3 333 aa11.13□□□□□ -0.63
CPSF4-206ENST00000441580 ATP6V1G2-DDX39BF2Z307 99 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms