RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 DUX1O43812 170 aa17.55■□□□□ 0.4
SHOX2-203ENST00000441443 CYB5R3P00387 301 aaPredicted RBP17.55■□□□□ 0.4
SHOX2-203ENST00000441443 RND2P52198 227 aa17.55■□□□□ 0.4
SHOX2-203ENST00000441443 NECAP1Q8NC96 275 aa17.55■□□□□ 0.4
SHOX2-203ENST00000441443 ZNF665Q9H7R5 613 aa17.55■□□□□ 0.4
SHOX2-203ENST00000441443 HERV-K104P61576 105 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 RNF4P78317 190 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 COL10A1Q03692 680 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 ZFP36L1Q07352 338 aaKnown RBP17.54■□□□□ 0.4
SHOX2-203ENST00000441443 PLXDC1Q8IUK5 500 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 ZNF100Q8IYN0 542 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 BATF2Q8N1L9 274 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 SLC25A45Q8N413 288 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 PP6455Q8WZ26 134 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 GNPNAT1Q96EK6 184 aaPredicted RBP17.54■□□□□ 0.4
SHOX2-203ENST00000441443 ANGPTL4Q9BY76 406 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 METTL9Q9H1A3 318 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 FSCN3Q9NQT6 498 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 GAB2Q9UQC2 676 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 UBE2J1Q9Y385 318 aaPredicted RBP17.54■□□□□ 0.4
SHOX2-203ENST00000441443 V9GYS6 101 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 TRDCB7Z8K6 153 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 HLA-HP01893 362 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 TUBG1P23258 451 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 FGF8P55075 233 aaPredicted RBP17.54■□□□□ 0.4
SHOX2-203ENST00000441443 CLEC12BQ2HXU8 276 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 THNSL2Q86YJ6 484 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 ZNF695Q8IW36 515 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 MOB3AQ96BX8 217 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 LRFN1Q9P244 771 aa17.54■□□□□ 0.4
SHOX2-203ENST00000441443 MPPED1O15442 326 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 TCEAL6Q6IPX3 200 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 FAM180AQ6UWF9 173 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 LCN15Q6UWW0 184 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 OR2AE1Q8NHA4 323 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 NAT6Q93015 286 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 DKKL1Q9UK85 242 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 H3BP45 60 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 OR2J2O76002 312 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 IGLV3-1P01715 115 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 H3F3AP84243 136 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 SPIN3Q5JUX0 258 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 CCDC71LQ8N9Z2 235 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 NOL4LQ96MY1 436 aaPredicted RBP17.53■□□□□ 0.4
SHOX2-203ENST00000441443 RBM14Q96PK6 669 aaKnown RBP17.53■□□□□ 0.4
SHOX2-203ENST00000441443 RALGAPA1Q6GYQ0 2036 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 CDS2O95674 445 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 DTYMKP23919 212 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 OR10A7Q8NGE5 316 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 OR1P1Q8NH06 330 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 CDH20Q9HBT6 801 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 DCAF16Q9NXF7 216 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 KLRF1Q9NZS2 232 aa17.53■□□□□ 0.4
SHOX2-203ENST00000441443 IGKV1-27A0A075B6S5 117 aa17.52■□□□□ 0.4
SHOX2-203ENST00000441443 HBE1P02100 147 aa17.52■□□□□ 0.4
SHOX2-203ENST00000441443 COX5BP10606 129 aa17.52■□□□□ 0.4
SHOX2-203ENST00000441443 TLE1Q04724 770 aa17.52■□□□□ 0.4
SHOX2-203ENST00000441443 CLN3Q13286 438 aa17.52■□□□□ 0.4
SHOX2-203ENST00000441443 RSPO1Q2MKA7 263 aaPredicted RBP17.52■□□□□ 0.4
SHOX2-203ENST00000441443 SNAI3Q3KNW1 292 aa17.52■□□□□ 0.4
SHOX2-203ENST00000441443 FAM69BQ5VUD6 431 aa17.52■□□□□ 0.4
SHOX2-203ENST00000441443 Q6ZPA2 131 aa17.52■□□□□ 0.4
SHOX2-203ENST00000441443 RAB24Q969Q5 203 aa17.52■□□□□ 0.4
SHOX2-203ENST00000441443 THOC3Q96J01 351 aaKnown RBP17.52■□□□□ 0.4
SHOX2-203ENST00000441443 TNRC18O15417 2968 aaPredicted RBP17.52■□□□□ 0.4
SHOX2-203ENST00000441443 SOX15O60248 233 aa17.52■□□□□ 0.39
SHOX2-203ENST00000441443 CEACAM6P40199 344 aa17.52■□□□□ 0.39
SHOX2-203ENST00000441443 ZNF41P51814 821 aaPredicted RBP17.52■□□□□ 0.39
SHOX2-203ENST00000441443 P2RY6Q15077 328 aa17.52■□□□□ 0.39
SHOX2-203ENST00000441443 IL22RA1Q8N6P7 574 aa17.52■□□□□ 0.39
SHOX2-203ENST00000441443 TMEM222Q9H0R3 208 aa17.52■□□□□ 0.39
SHOX2-203ENST00000441443 TRBV24-1A0A075B6N3 115 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 CHST1O43916 411 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 SLC10A1Q14973 349 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 SLC25A24Q6NUK1 477 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 XKRY2A2RUG3 117 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 MMP7P09237 267 aaPredicted RBP17.51■□□□□ 0.39
SHOX2-203ENST00000441443 TNFRSF9Q07011 255 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 OR6X1Q8NH79 312 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 POC1BQ8TC44 478 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 HIST1H2AAQ96QV6 131 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 VSIRQ9H7M9 311 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 ZNF286AQ9HBT8 521 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 SDF2L1Q9HCN8 221 aa17.51■□□□□ 0.39
SHOX2-203ENST00000441443 PPYP01298 95 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 CLDN17P56750 224 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 RAB4BP61018 213 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 TBC1D26Q86UD7 250 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 C17orf82Q86X59 251 aaPredicted RBP17.5■□□□□ 0.39
SHOX2-203ENST00000441443 RSG1Q9BU20 258 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 ACTR3CQ9C0K3 210 aaPredicted RBP17.5■□□□□ 0.39
SHOX2-203ENST00000441443 MRPS17Q9Y2R5 130 aaKnown RBP17.5■□□□□ 0.39
SHOX2-203ENST00000441443 RNASEH2CQ8TDP1 164 aaKnown RBP17.5■□□□□ 0.39
SHOX2-203ENST00000441443 TMEM242Q9NWH2 141 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 A0A0U1RQV5 110 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 A0A1B0GWJ7 208 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 A0A1B0GX78 115 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 OPN1MWP04001 364 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 OPN1MW2P0DN77 364 aa17.5■□□□□ 0.39
SHOX2-203ENST00000441443 OPN1MW3P0DN78 364 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms