RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 RNFT2Q96EX2 444 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 CENPNQ96H22 339 aaPredicted RBP6.2□□□□□ -1.42
VPS50-203ENST00000436177 HRASLS5Q96KN8 279 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 RBM14Q96PK6 669 aaKnown RBP6.2□□□□□ -1.42
VPS50-203ENST00000436177 SPACA5Q96QH8 159 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 GPER1Q99527 375 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 GABARAPL3Q9BY60 117 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 COMMD4Q9H0A8 199 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 ZMAT5Q9UDW3 170 aaKnown RBP6.2□□□□□ -1.42
VPS50-203ENST00000436177 OAZ3Q9UMX2 235 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 PLXNB1O43157 2135 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 MEIKINA0A087WXM9 373 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 IGKV1-9A0A0C4DH69 117 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 ZNF729A6NN14 1252 aaPredicted RBP6.19□□□□□ -1.42
VPS50-203ENST00000436177 BUB1B-PAK6H3BSN5 160 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 J3QLW9 94 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 MMP23AO75900 390 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 KDM4BO94953 1096 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 MT-ND2P03891 347 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 ISG15P05161 165 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 ZNF19P17023 458 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 CD34P28906 385 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 C21orf33P30042 268 aaPredicted RBP6.19□□□□□ -1.42
VPS50-203ENST00000436177 SLC35B1P78383 322 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 ZNF85Q03923 595 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 CD69Q07108 199 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 VAX1Q5SQQ9 334 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 MEDAGQ5VYS4 303 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 LPCAT4Q643R3 524 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 UNQ9370/PRO34162Q6UXP9 181 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 OSR2Q8N2R0 312 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 ACBD7Q8N6N7 88 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 ZNF565Q8N9K5 539 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 WFDC9Q8NEX5 89 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 OR5D14Q8NGL3 314 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 OR10X1Q8NGY0 326 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 OR56B4Q8NH76 319 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 OR9G1Q8NH87 305 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 TRUB1Q8WWH5 349 aaKnown RBP6.19□□□□□ -1.42
VPS50-203ENST00000436177 C4orf36Q96KX1 117 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 MBOAT4Q96T53 435 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 MCRIP2Q9BUT9 160 aaKnown RBP6.19□□□□□ -1.42
VPS50-203ENST00000436177 BARHL1Q9BZE3 327 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 FAM192AQ9GZU8 254 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 ZCCHC4Q9H5U6 513 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 ZNF286AQ9HBT8 521 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 DHDHQ9UQ10 334 aa6.19□□□□□ -1.42
VPS50-203ENST00000436177 KBTBD11-OT1A0A1B0GTJ5 212 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 SH2D7A6NKC9 451 aaPredicted RBP6.18□□□□□ -1.42
VPS50-203ENST00000436177 TMEM212A6NML5 194 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 SERPINE3A8MV23 424 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 H0YJX3 145 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 SLC33A1O00400 549 aaPredicted RBP6.18□□□□□ -1.42
VPS50-203ENST00000436177 SULT1B1O43704 296 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 ATP5HO75947 161 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 FADS2O95864 444 aaKnown RBP6.18□□□□□ -1.42
VPS50-203ENST00000436177 IGLV1-47P01700 117 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 CD2P06729 351 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 CCDC159P0C7I6 412 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 TMEM11P17152 192 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 RAB3AP20336 220 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 SLC6A1P30531 599 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 POLR2IP36954 125 aaKnown RBP6.18□□□□□ -1.42
VPS50-203ENST00000436177 MTNR1BP49286 362 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 CCR9P51686 369 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 ISL1P61371 349 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 MRPL28Q13084 256 aaKnown RBP6.18□□□□□ -1.42
VPS50-203ENST00000436177 RSU1Q15404 277 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 LTC4SQ16873 150 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 FDX2Q6P4F2 183 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 BAIAP2L2Q6UXY1 529 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 SATL1Q86VE3 508 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 SERPINA12Q8IW75 414 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 FOXRED2Q8IWF2 684 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 HAVCR2Q8TDQ0 301 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 CHPT1Q8WUD6 406 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 CORO2AQ92828 525 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 COQ2Q96H96 371 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 NR1H4Q96RI1 486 aaPredicted RBP6.18□□□□□ -1.42
VPS50-203ENST00000436177 CALYQ9NYX4 217 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 KIF25Q9UIL4 384 aa6.18□□□□□ -1.42
VPS50-203ENST00000436177 IGKV1-12A0A0C4DH73 117 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 K7EIL1 84 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 IL1AP01583 271 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 IGKV1D-12P01611 117 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 SNRNP70P08621 437 aaKnown RBP6.17□□□□□ -1.42
VPS50-203ENST00000436177 LMO1P25800 156 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 IL3RAP26951 378 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 HOXD3P31249 432 aaPredicted RBP6.17□□□□□ -1.42
VPS50-203ENST00000436177 KCNJ3P48549 501 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 GNG10P50151 68 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 RAB7AP51149 207 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 GBX2P52951 348 aaPredicted RBP6.17□□□□□ -1.42
VPS50-203ENST00000436177 RAB25P57735 213 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 NANOS3P60323 173 aaKnown RBP6.17□□□□□ -1.42
VPS50-203ENST00000436177 SNRPGP62308 76 aaKnown RBP6.17□□□□□ -1.42
VPS50-203ENST00000436177 PPP3R1P63098 170 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 ALKBH1Q13686 389 aaKnown RBP6.17□□□□□ -1.42
VPS50-203ENST00000436177 HNF4GQ14541 408 aa6.17□□□□□ -1.42
VPS50-203ENST00000436177 KISS1Q15726 138 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms