RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 POLDIP2Q9Y2S7 368 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 NSG2Q9Y328 171 aa14.26□□□□□ -0.13
LIMK1-203ENST00000435201 TRAV24A0A0B4J272 114 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 PRR33A8MZF0 331 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 GPR31O00270 319 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 CEACAM4O75871 244 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 TUSC2O75896 110 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 SCGB1D2O95969 90 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 COX5AP20674 150 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 GNRHRP30968 328 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 HOXC12P31275 282 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 DEFB109BQ30KR1 87 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 FAM76BQ5HYJ3 339 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 LDLRAD3Q86YD5 345 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 CNEP1R1Q8N9A8 125 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 TMED6Q8WW62 240 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 ASF1BQ9NVP2 202 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 GLS2Q9UI32 602 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 PCDHB10Q9UN67 800 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 FAM186AA6NE01 2351 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 SHANK1Q9Y566 2161 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 RAB19A4D1S5 217 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 NUDT19A8MXV4 375 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 MBPP02686 304 aaPredicted RBP14.25□□□□□ -0.13
LIMK1-203ENST00000435201 GAPDHP04406 335 aaKnown RBP14.25□□□□□ -0.13
LIMK1-203ENST00000435201 CBR1P16152 277 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 MDH2P40926 338 aaKnown RBP14.25□□□□□ -0.13
LIMK1-203ENST00000435201 HERPUD1Q15011 391 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 ZNF880Q6PDB4 577 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 STPG2Q8N412 459 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 SPERTQ8NA61 448 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 MARC2Q969Z3 335 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 ADAT1Q9BUB4 502 aaKnown RBP14.25□□□□□ -0.13
LIMK1-203ENST00000435201 TMEM222Q9H0R3 208 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 OR2S2Q9NQN1 319 aa14.25□□□□□ -0.13
LIMK1-203ENST00000435201 A0A1W2PR80 420 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 IQCF6A8MYZ5 107 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 HS3ST1O14792 307 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 DEGS1O15121 323 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 RHBDL1O75783 438 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 KIR2DL2P43627 348 aaPredicted RBP14.24□□□□□ -0.13
LIMK1-203ENST00000435201 C17orf78Q8N4C9 275 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 C9orf106Q8NAJ2 232 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 OR4A4PQ8NGN8 299 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 OR1S2Q8NGQ3 325 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 SLC25A40Q8TBP6 338 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 SECTM1Q8WVN6 248 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 TP53RKQ96S44 253 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 DLL3Q9NYJ7 618 aa14.24□□□□□ -0.13
LIMK1-203ENST00000435201 JTBO76095 146 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 UCP2P55851 309 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 HLA-DRB3P79483 266 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 SPIN3Q5JUX0 258 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 MOB1BQ7L9L4 216 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 TBC1D26Q86UD7 250 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 SLC35G3Q8N808 338 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 SCCPDHQ8NBX0 429 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 OR1J1Q8NGS3 322 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 LHFPL5Q8TAF8 219 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 RDH5Q92781 318 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 TMEM56Q96MV1 263 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 TAF9BQ9HBM6 251 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 TREM2Q9NZC2 230 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 TMEM56-RWDD3S4R434 201 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 ESPL1Q14674 2120 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 IGKV1-6A0A0C4DH72 117 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 DUXBA0A1W2PPF3 345 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 TMEM210A6NLX4 147 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 CDS2O95674 445 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 IGKV3-15P01624 115 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 ZNF44P15621 663 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 ACSF3Q4G176 576 aaPredicted RBP14.23□□□□□ -0.13
LIMK1-203ENST00000435201 TMEM268Q5VZI3 342 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 RPL7L1Q6DKI1 246 aaKnown RBP14.23□□□□□ -0.13
LIMK1-203ENST00000435201 Q6P435 159 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 MEX3BQ6ZN04 569 aaKnown RBP14.23□□□□□ -0.13
LIMK1-203ENST00000435201 ZNF818PQ6ZRF7 136 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 WDR86Q86TI4 376 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 C17orf50Q8WW18 174 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 ARL11Q969Q4 196 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 FBXL17Q9UF56 701 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 AMDHD2Q9Y303 409 aa14.23□□□□□ -0.13
LIMK1-203ENST00000435201 UBE2J1Q9Y385 318 aaPredicted RBP14.23□□□□□ -0.13
LIMK1-203ENST00000435201 AHRRA9YTQ3 701 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 ST8SIA3O43173 380 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 HOXD4P09016 255 aaPredicted RBP14.22□□□□□ -0.13
LIMK1-203ENST00000435201 FAM157CP0CG43 387 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 GLI4P10075 376 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 TUBG1P23258 451 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 ERVK11-1P61568 191 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 GPR157Q5UAW9 335 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 SHEQ5VZ18 495 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 VWA1Q6PCB0 445 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 CMTM1Q8IZ96 169 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 GAPTQ8N292 157 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 ZADH2Q8N4Q0 377 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 SAT2Q96F10 170 aaPredicted RBP14.22□□□□□ -0.13
LIMK1-203ENST00000435201 SPIN2AQ99865 258 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 SPIN2BQ9BPZ2 258 aa14.22□□□□□ -0.13
LIMK1-203ENST00000435201 CABLES2Q9BTV7 478 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms