RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 OR10AD1Q8NGE0 317 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 OR1F12Q8NHA8 337 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 CPT1CQ8TCG5 803 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 MR1Q95460 341 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 RAB39BQ96DA2 213 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 RASL10BQ96S79 203 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 HDHD3Q9BSH5 251 aaPredicted RBP12.77□□□□□ -0.36
DDX56-205ENST00000433257 RBM24Q9BX46 236 aaKnown RBP12.77□□□□□ -0.36
DDX56-205ENST00000433257 ZNF700Q9H0M5 742 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 SH3BGRL3Q9H299 93 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 GFOD1Q9NXC2 390 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 ZDHHC8Q9ULC8 765 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 WSB1Q9Y6I7 421 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 U3KQA8 63 aa12.77□□□□□ -0.36
DDX56-205ENST00000433257 CEP250Q9BV73 2442 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 KIR2DS1A0A191URI9 304 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 OR6C6A6NF89 314 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 ZNF814B7Z6K7 855 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 E9PLN8 166 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 PPP1R2P9O14990 202 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 TK1P04183 234 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 FTH1P19P0C7X4 201 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 DAOP14920 347 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 KIR2DS4P43632 304 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 DEFA6Q01524 100 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 KIR2DS1Q14954 304 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 ZNF674Q2M3X9 581 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 KRTAP27-1Q3LI81 207 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 IGSF11Q5DX21 431 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 OR2B11Q5JQS5 317 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 ACER2Q5QJU3 275 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 SHISA6Q6ZSJ9 500 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 H1FOOQ8IZA3 346 aaPredicted RBP12.77□□□□□ -0.37
DDX56-205ENST00000433257 TMEM252Q8N6L7 170 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 P2RX4Q99571 388 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 ATP5SQ99766 215 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 RIMS4Q9H426 269 aaPredicted RBP12.77□□□□□ -0.37
DDX56-205ENST00000433257 ST3GAL6Q9Y274 331 aa12.77□□□□□ -0.37
DDX56-205ENST00000433257 CCDC187A0A096LP49 1063 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 ZNF816-ZNF321PA0A0X1KG74 233 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 RPL36A-HNRNPH2H7BZ11 118 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 HSD17B6O14756 317 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 SYNGR3O43761 229 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 SCRG1O75711 98 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 IFNA5P01569 189 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 WNT2P09544 360 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 OPRM1P35372 400 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 RBM11P57052 281 aaKnown RBP12.76□□□□□ -0.37
DDX56-205ENST00000433257 RSPO1Q2MKA7 263 aaPredicted RBP12.76□□□□□ -0.37
DDX56-205ENST00000433257 SP5Q6BEB4 398 aaPredicted RBP12.76□□□□□ -0.37
DDX56-205ENST00000433257 SPSB3Q6PJ21 355 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 STX12Q86Y82 276 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 CMTM1Q8IZ96 169 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 C1orf87Q8N0U7 546 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 IL22RA1Q8N6P7 574 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 Q8NFD4 153 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 M1APQ8TC57 530 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 BSCL2Q96G97 398 aaPredicted RBP12.76□□□□□ -0.37
DDX56-205ENST00000433257 CTDSP1Q9GZU7 261 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 LIME1Q9H400 295 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 WDR54Q9H977 334 aa12.76□□□□□ -0.37
DDX56-205ENST00000433257 PTBP3O95758 552 aaKnown RBP12.75□□□□□ -0.37
DDX56-205ENST00000433257 IFNA1P01562 189 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 AADACP22760 399 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 UCP1P25874 307 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 FHITP49789 147 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 RRADP55042 308 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 TAS2R30P59541 319 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 RPL23AP62750 156 aaKnown RBP12.75□□□□□ -0.37
DDX56-205ENST00000433257 RAC1P63000 192 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 HLA-DRB3P79483 266 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 ID3Q02535 119 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 ELOBQ15370 118 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 OR5D13Q8NGL4 314 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 CPNE4Q96A23 557 aaPredicted RBP12.75□□□□□ -0.37
DDX56-205ENST00000433257 ZNF442Q9H7R0 627 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 DOK5Q9P104 306 aa12.75□□□□□ -0.37
DDX56-205ENST00000433257 CHCHD2Q9Y6H1 151 aaPredicted RBP12.75□□□□□ -0.37
DDX56-205ENST00000433257 IGSF23A1L1A6 192 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 FAM24AA6NFZ4 105 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 LCATP04180 440 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 NDUFA6P56556 154 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 DLK1P80370 383 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 SNAI3Q3KNW1 292 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 NRN1LQ496H8 165 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 LBHQ53QV2 105 aaPredicted RBP12.74□□□□□ -0.37
DDX56-205ENST00000433257 ZNF600Q6ZNG1 722 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 LINC00596Q86U02 117 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 SELENOHQ8IZQ5 122 aaKnown RBP12.74□□□□□ -0.37
DDX56-205ENST00000433257 KCNE4Q8WWG9 221 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 GTF3AQ92664 365 aaKnown RBP12.74□□□□□ -0.37
DDX56-205ENST00000433257 RAB40CQ96S21 281 aa12.74□□□□□ -0.37
DDX56-205ENST00000433257 LOC102723996A0A087X1L8 192 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 NKX2-6A6NCS4 301 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 H0Y980 276 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 GEMIN2O14893 280 aaKnown RBP12.73□□□□□ -0.37
DDX56-205ENST00000433257 SPRY1O43609 319 aaPredicted RBP12.73□□□□□ -0.37
DDX56-205ENST00000433257 ANGPTL7O43827 346 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 RAMP1O60894 148 aa12.73□□□□□ -0.37
DDX56-205ENST00000433257 C1QL1O75973 258 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms