RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 CDRT1O95170 752 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 FADS2O95864 444 aaKnown RBP9.38□□□□□ -0.91
HDAC4-202ENST00000430200 MTNR1BP49286 362 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 ABCA11PQ4W5N1 156 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 ELP2Q6IA86 826 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 LAIR2Q6ISS4 152 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 CCDC121Q6ZUS5 278 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 NDUFA11Q86Y39 141 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 ZFP41Q8N8Y5 198 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 ZNF485Q8NCK3 441 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 Q8NFD4 153 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 UBALD1Q8TB05 177 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 R3HDM4Q96D70 268 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 SLC25A33Q9BSK2 321 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 FAM192AQ9GZU8 254 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 INPP5EQ9NRR6 644 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 CALYQ9NYX4 217 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 PITPNC1Q9UKF7 332 aa9.38□□□□□ -0.91
HDAC4-202ENST00000430200 TRAV8-7A0A075B6U6 113 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 KBTBD11-OT1A0A1B0GTJ5 212 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 A0A1W2PPE3 182 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 ZNF729A6NN14 1252 aaPredicted RBP9.37□□□□□ -0.91
HDAC4-202ENST00000430200 DEGS1O15121 323 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 LPLP06858 475 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 CCDC159P0C7I6 412 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 OCM2P0CE71 109 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 OCMP0CE72 109 aaPredicted RBP9.37□□□□□ -0.91
HDAC4-202ENST00000430200 NFYBP25208 207 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 RPS11P62280 158 aaKnown RBP eCLIP9.37□□□□□ -0.91
HDAC4-202ENST00000430200 CD83Q01151 205 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 RBM39Q14498 530 aaKnown RBP9.37□□□□□ -0.91
HDAC4-202ENST00000430200 LTC4SQ16873 150 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 PAN3Q58A45 887 aaKnown RBP9.37□□□□□ -0.91
HDAC4-202ENST00000430200 ASCL4Q6XD76 172 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 ZBTB49Q6ZSB9 765 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 SERPINA12Q8IW75 414 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 CHST4Q8NCG5 386 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 PXT1Q8NFP0 134 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 OR56B4Q8NH76 319 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 MRGPRDQ8TDS7 321 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 TMEM106AQ96A25 262 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 PHF21AQ96BD5 680 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 PGLYRP3Q96LB9 341 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 LIN7BQ9HAP6 207 aa9.37□□□□□ -0.91
HDAC4-202ENST00000430200 MEIKINA0A087WXM9 373 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 NPIPB11E5RHQ5 1161 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 OR2F2O95006 317 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 IL1AP01583 271 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 GNAO1P09471 354 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 RAB3AP20336 220 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 GNG10P50151 68 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 GBX2P52951 348 aaPredicted RBP9.36□□□□□ -0.91
HDAC4-202ENST00000430200 RBM11P57052 281 aaKnown RBP9.36□□□□□ -0.91
HDAC4-202ENST00000430200 IL13RA2Q14627 380 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 ETV3LQ6ZN32 361 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 C18orf65Q6ZTR6 163 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 RTN4RL2Q86UN3 420 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 SATL1Q86VE3 508 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 OR5AU1Q8NGC0 362 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 OR5D14Q8NGL3 314 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 RFESDQ8TAC1 157 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 ZNF596Q8TC21 504 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 RBM14Q96PK6 669 aaKnown RBP9.36□□□□□ -0.91
HDAC4-202ENST00000430200 LINC00574Q9H8X3 128 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 RHOFQ9HBH0 211 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 AURKAIP1Q9NWT8 199 aaPredicted RBP9.36□□□□□ -0.91
HDAC4-202ENST00000430200 SMPD3Q9NY59 655 aaPredicted RBP9.36□□□□□ -0.91
HDAC4-202ENST00000430200 GLS2Q9UI32 602 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 PSG11Q9UQ72 335 aa9.36□□□□□ -0.91
HDAC4-202ENST00000430200 RPL36Q9Y3U8 105 aaKnown RBP9.36□□□□□ -0.91
HDAC4-202ENST00000430200 TRBV5-5A0A0J9YX44 114 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 FAM90A18PA6NE21 464 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 FAM90A16PA6NEW6 464 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 FAM90A20PA6NIJ5 464 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 SNTNA6NMZ2 147 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 FAM90A9PA6NNJ1 464 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 FAM90A12PA8MX19 464 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 FAM90A5PA8MXJ8 464 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 LEUTXA8MZ59 168 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 J3QR06 171 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 GEMIN2O14893 280 aaKnown RBP9.35□□□□□ -0.91
HDAC4-202ENST00000430200 MPZL2O60487 215 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 SNRNP70P08621 437 aaKnown RBP9.35□□□□□ -0.91
HDAC4-202ENST00000430200 RPSAP08865 295 aaKnown RBP9.35□□□□□ -0.91
HDAC4-202ENST00000430200 FAM90A15PP0C7V4 464 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 FAM90A13PP0C7W8 464 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 FAM90A14PP0C7W9 464 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 FAM90A24PP0C7X0 464 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 IGLL1P15814 213 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 IGFBP3P17936 291 aaPredicted RBP9.35□□□□□ -0.91
HDAC4-202ENST00000430200 PAX5Q02548 391 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 LRRC36Q1X8D7 754 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 ARSJQ5FYB0 599 aaPredicted RBP9.35□□□□□ -0.91
HDAC4-202ENST00000430200 DDI2Q5TDH0 399 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 OR52W1Q6IF63 320 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 C5orf24Q7Z6I8 188 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 SUMF2Q8NBJ7 301 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 OR4D6Q8NGJ1 314 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 GPR148Q8TDV2 347 aa9.35□□□□□ -0.91
HDAC4-202ENST00000430200 MYDGFQ969H8 173 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms