RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 TRAPPC5Q8IUR0 188 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 C10orf107Q8IVU9 208 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 PDZD9Q8IXQ8 264 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 SLC35F2Q8IXU6 374 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 KATNAL2Q8IYT4 538 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 OFCC1Q8IZS5 231 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 UMODL1-AS1Q8N2C9 162 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 OR4C5Q8NGB2 326 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 OR51G2Q8NGK0 314 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 OR5L2Q8NGL0 311 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 OR13D1Q8NGV5 346 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 CD300LFQ8TDQ1 290 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 C1orf54Q8WWF1 131 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 ASB13Q8WXK3 278 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 AP3S1Q92572 193 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 ROPN1LQ96C74 230 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 C10orf35Q96D05 121 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 CMTM7Q96FZ5 175 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 LINC00479Q96M42 142 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 MCCC1Q96RQ3 725 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 EBNA1BP2Q99848 306 aaKnown RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 TMEM208Q9BTX3 173 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF426Q9BUY5 554 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 SLITRK2Q9H156 845 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 TUBA4BQ9H853 241 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 WDR54Q9H977 334 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 ACOT13Q9NPJ3 140 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 HRASLS2Q9NWW9 162 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 SCN3BQ9NY72 215 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 IL36GQ9NZH8 169 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 PDP1Q9P0J1 537 aaPredicted RBP3.21□□□□□ -1.9
HMGB3-203ENST00000430118 CD84Q9UIB8 345 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 PROCRQ9UNN8 238 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 CSAG2Q9Y5P2 127 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 SNX10Q9Y5X0 201 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 HEBP2Q9Y5Z4 205 aa3.21□□□□□ -1.9
HMGB3-203ENST00000430118 MEIKINA0A087WXM9 373 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 NSG1A0A0A6YYJ2 146 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 A0A1B0GTH9 108 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 FRG2CA6NGY1 282 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 ERI2A8K979 691 aaKnown RBP3.2□□□□□ -1.9
HMGB3-203ENST00000430118 DISC1C4P0D8 188 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 RPL36A-HNRNPH2H7BZ11 118 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 UBDO15205 165 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 ARPC5O15511 151 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 RAMP3O60896 148 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 RDH16O75452 317 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 UPK3AO75631 287 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 SLC25A14O95258 325 aaPredicted RBP3.2□□□□□ -1.9
HMGB3-203ENST00000430118 LSM8O95777 96 aaKnown RBP3.2□□□□□ -1.9
HMGB3-203ENST00000430118 AP2A1O95782 977 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 C6orf47O95873 294 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 SOD1P00441 154 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 MT-ND4LP03901 98 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 MELTFP08582 738 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 NBEAP1P0C6P0 100 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 SCGB1A1P11684 91 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 ATP6V1B2P21281 511 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF10P21506 573 aaPredicted RBP3.2□□□□□ -1.9
HMGB3-203ENST00000430118 ELK4P28324 431 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 S100A2P29034 98 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 SLC6A1P30531 599 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 MAS1LP35410 378 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 ACVR1BP36896 505 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 ELK3P41970 407 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 NSG1P42857 185 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 GABRA4P48169 554 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 WNT4P56705 351 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 AP3S2P59780 193 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 HILS1P60008 231 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 CDC42P60953 191 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 EIF5AP63241 154 aaKnown RBP3.2□□□□□ -1.9
HMGB3-203ENST00000430118 EMX2Q04743 252 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 PIGHQ14442 188 aaPredicted RBP3.2□□□□□ -1.9
HMGB3-203ENST00000430118 PSG3Q16557 428 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 NDUFAF6Q330K2 333 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 KRTAP24-1Q3LI83 254 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 LGALSLQ3ZCW2 172 aaPredicted RBP3.2□□□□□ -1.9
HMGB3-203ENST00000430118 KLHL22Q53GT1 634 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 PYY3Q5JQD4 70 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 FAM74A1Q5RGS3 127 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 HIST2H3PS2Q5TEC6 136 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF691Q5VV52 312 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 CYB5R2Q6BCY4 276 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 CYHR1Q6ZMK1 362 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 OAFQ86UD1 273 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 NAA40Q86UY6 237 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 PUSL1Q8N0Z8 303 aaKnown RBP3.2□□□□□ -1.9
HMGB3-203ENST00000430118 LINC01561Q8N1V8 128 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF555Q8NEP9 628 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 WFDC11Q8NEX6 87 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 OR2M7Q8NG81 312 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 OR4F6Q8NGB9 312 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 OR1L4Q8NGR5 311 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 OR51A7Q8NH64 312 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 OR1S1Q8NH92 325 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 KCNG3Q8TAE7 436 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 LKAAEAR1Q8TD35 194 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 RXFP4Q8TDU9 374 aa3.2□□□□□ -1.9
HMGB3-203ENST00000430118 C16orf78Q8WTQ4 265 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms