RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 ZNF391Q9UJN7 358 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 LIPGQ9Y5X9 500 aa12.95□□□□□ -0.34
LINC00839-202ENST00000429940 KIAA1549Q9HCM3 1950 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 HSD17B6O14756 317 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 SRP19P09132 144 aaKnown RBP12.94□□□□□ -0.34
LINC00839-202ENST00000429940 RAB2AP61019 212 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 UBE2KP61086 200 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 EXT1Q16394 746 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 CXorf66Q5JRM2 361 aaPredicted RBP12.94□□□□□ -0.34
LINC00839-202ENST00000429940 TMEM56Q96MV1 263 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 SF3B5Q9BWJ5 86 aaKnown RBP12.94□□□□□ -0.34
LINC00839-202ENST00000429940 GLRX2Q9NS18 164 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 SLC7A10Q9NS82 523 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 TINAGQ9UJW2 476 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 TMEM56-RWDD3S4R434 201 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 ASPMQ8IZT6 3477 aa12.94□□□□□ -0.34
LINC00839-202ENST00000429940 IGHV1-45A0A0A0MS14 117 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 PROB1E7EW31 1015 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 ADAM20O43506 726 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 YIF1AO95070 293 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 NTF4P34130 210 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 SSR4P51571 173 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 DYNLT3P51808 116 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 PSG4Q00888 419 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 KRTAP27-1Q3LI81 207 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 CALHM1Q8IU99 346 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 SELENOHQ8IZQ5 122 aaKnown RBP12.93□□□□□ -0.34
LINC00839-202ENST00000429940 LINC00469Q8N7U9 141 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF611Q8N823 705 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 GGACTQ9BVM4 153 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 FAM86C1Q9NVL1 165 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 PTRH2Q9Y3E5 179 aaKnown RBP12.93□□□□□ -0.34
LINC00839-202ENST00000429940 LOC102723996A0A087X1L8 192 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 TRBV23-1A0A0A0MS06 115 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 GJE1A6NN92 205 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 H0YL77 283 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 CST7O76096 145 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 HOXA5P20719 270 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 MPLP40238 635 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 PEAR1Q5VY43 1037 aaPredicted RBP12.93□□□□□ -0.34
LINC00839-202ENST00000429940 SLC25A26Q70HW3 274 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 CPT1CQ8TCG5 803 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 OCIAD1Q9NX40 245 aa12.93□□□□□ -0.34
LINC00839-202ENST00000429940 LY6G6EA0A0G2JKS1 128 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF816-ZNF321PA0A0X1KG74 233 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 RPL36A-HNRNPH2H7BZ11 118 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 CYC1P08574 325 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 FBP1P09467 338 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 NPBWR2P48146 333 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 ICAM4Q14773 271 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 DAZAP2Q15038 168 aaPredicted RBP12.92□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF429Q86V71 674 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 TMEM217Q8N7C4 229 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 GNPNAT1Q96EK6 184 aaPredicted RBP12.92□□□□□ -0.34
LINC00839-202ENST00000429940 ABHD14BQ96IU4 210 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 OR2H1Q9GZK4 316 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 WNT5BQ9H1J7 359 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 U3KQA8 63 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 ZFHX2Q9C0A1 2572 aaPredicted RBP12.92□□□□□ -0.34
LINC00839-202ENST00000429940 A0A087WWC5 75 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF732B4DXR9 585 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 GDF9O60383 454 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 CBR3O75828 277 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 SCAF4O95104 1147 aaKnown RBP12.92□□□□□ -0.34
LINC00839-202ENST00000429940 NXPH3O95157 252 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 NDUFA6P56556 154 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 RAC3P60763 192 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 DLK1P80370 383 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 RUNX1Q01196 453 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF674Q2M3X9 581 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF343Q6P1L6 599 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 ZNF818PQ6ZRF7 136 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 C5orf24Q7Z6I8 188 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 CYB561D1Q8N8Q1 229 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 Q8WTZ3 238 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 EXTL1Q92935 676 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 TECTBQ96PL2 329 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 GPHA2Q96T91 129 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 BCL2L14Q9BZR8 327 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 WDR54Q9H977 334 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 PARPBPQ9NWS1 579 aa12.92□□□□□ -0.34
LINC00839-202ENST00000429940 SLC33A1O00400 549 aaPredicted RBP12.91□□□□□ -0.34
LINC00839-202ENST00000429940 TK1P04183 234 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 EPHA1P21709 976 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 CDX1P47902 265 aaPredicted RBP12.91□□□□□ -0.34
LINC00839-202ENST00000429940 ELOBQ15370 118 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 AKR1C8PQ5T2L2 129 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 AAED1Q7RTV5 226 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 ODF3L1Q8IXM7 274 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 GAPTQ8N292 157 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 IL22RA1Q8N6P7 574 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 FGFBP3Q8TAT2 258 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 CPNE4Q96A23 557 aaPredicted RBP12.91□□□□□ -0.34
LINC00839-202ENST00000429940 IMMP1LQ96LU5 166 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 FOXB1Q99853 325 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 WSB1Q9Y6I7 421 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 TMEM50AO95807 157 aa12.91□□□□□ -0.34
LINC00839-202ENST00000429940 HSPB1P04792 205 aaKnown RBP12.91□□□□□ -0.34
LINC00839-202ENST00000429940 CXCL1P09341 107 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms