RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 NCR3LG1Q68D85 454 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 SPNS3Q6ZMD2 512 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 FOXO1Q12778 655 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 OR10A7Q8NGE5 316 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 OR51H1Q8NH63 302 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 SHANK1Q9Y566 2161 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 IGHV1OR15-9A0A0B4J2B8 117 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 C5orf63A6NC05 138 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 OR6C6A6NF89 314 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 FOXI3A8MTJ6 420 aaPredicted RBP9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 ZNF814B7Z6K7 855 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 PPIHO43447 177 aaKnown RBP9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 CXCL1P09341 107 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 ICAM4Q14773 271 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 COL19A1Q14993 1142 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 GAPTQ8N292 157 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 LHX4Q969G2 390 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 RASL10BQ96S79 203 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 GPR87Q9BY21 358 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 HSPB6O14558 160 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 CYTIPO60759 359 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 IGLV3-19P01714 112 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 SYT13Q7L8C5 426 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 MRPL41Q8IXM3 137 aaKnown RBP9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 ZNF709Q8N972 641 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 SSC4DQ8WTU2 575 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 CYYR1Q96J86 154 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 LAMP3Q9UQV4 416 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 NUP210LQ5VU65 1888 aa9.33□□□□□ -0.92
ATP2C1-204ENST00000428331 BCL2P10415 239 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 RAB30Q15771 203 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 LBHQ53QV2 105 aaPredicted RBP9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 ZNF611Q8N823 705 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 PSMF1Q92530 271 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 PINX1Q96BK5 328 aaKnown RBP9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 P4HTMQ9NXG6 502 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 A0A1B0GV90 55 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 ARGFXA6NJG6 315 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 RBMXL2O75526 392 aaKnown RBP9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 ZNF32P17041 273 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 RBM11P57052 281 aaKnown RBP9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 ERVFRD-1P60508 538 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 MRPL21Q7Z2W9 205 aaKnown RBP9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 GPR27Q9NS67 375 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 ZDHHC8Q9ULC8 765 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 C9J4A7 227 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 G3V3Y1 287 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 H3BMH7 237 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 MYF5P13349 255 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 B4GALT1P15291 398 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 PSMB3P49720 205 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 SELENOHQ8IZQ5 122 aaKnown RBP9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 HIST3H2BBQ8N257 126 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 CLDND2Q8NHS1 167 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 KCNS2Q9ULS6 477 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 TRAPPC6AO75865 159 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 PGA5P0DJD9 388 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 NFAM1Q8NET5 270 aaPredicted RBP9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 IL1F10Q8WWZ1 152 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 FRZBQ92765 325 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 VAX2Q9UIW0 290 aa9.32□□□□□ -0.92
ATP2C1-204ENST00000428331 RAB4BP61018 213 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 SPSB3Q6PJ21 355 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 ZNF66Q6ZN08 573 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 CA5BP1Q8WTZ4 195 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 TMEM18Q96B42 140 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 UCN2Q96RP3 112 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 RIMS4Q9H426 269 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 PLSCR2Q9NRY7 297 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 CEP290O15078 2479 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 LOC102723971A0A1B0GUV8 181 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 LRP5LA4QPB2 252 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 E9PLN8 166 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 ELLP55199 621 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 DSCR4P56555 118 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 HIST3H3Q16695 136 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 TMEM241Q24JQ0 296 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 RSPO4Q2I0M5 234 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 MRGPRGQ86SM5 289 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 OR10J5Q8NHC4 309 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 LIME1Q9H400 295 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 PSENENQ9NZ42 101 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 FOXD3Q9UJU5 478 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 MRPS17Q9Y2R5 130 aaKnown RBP9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 IGLV3-32A0A0A0MS00 114 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 CARD18P57730 90 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 NXPH1P58417 271 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 TMEM267Q0VDI3 215 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 TESK1Q15569 626 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 KCNIP4Q6PIL6 250 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 NECAP1Q8NC96 275 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 TMEM56Q96MV1 263 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 SCRT1Q9BWW7 348 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 TMEM56-RWDD3S4R434 201 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 MAP1LC3B2A6NCE7 125 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 RPL36A-HNRNPH2H7BZ11 118 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 ETV2O00321 342 aaPredicted RBP9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 CST2P09228 141 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 ZNF880Q6PDB4 577 aa9.31□□□□□ -0.92
ATP2C1-204ENST00000428331 C17orf82Q86X59 251 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms