RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 NPTNQ9Y639 398 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 POM121BA6NF01 834 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 DIRC3C9JPN6 131 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 SPPL3Q8TCT6 385 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 FBXO17Q96EF6 278 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 MRPL13Q9BYD1 178 aaKnown RBP12.8□□□□□ -0.36
PTPN13-203ENST00000427191 COA4Q9NYJ1 87 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 TDRD6O60522 2096 aaKnown RBP12.8□□□□□ -0.36
PTPN13-203ENST00000427191 CRHP06850 196 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 ZNF25P17030 456 aaPredicted RBP12.8□□□□□ -0.36
PTPN13-203ENST00000427191 CCR2P41597 374 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 DEFB109BQ30KR1 87 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 CADM4Q8NFZ8 388 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 IL19Q9UHD0 177 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 SSPNQ14714 243 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 AGERQ15109 404 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 PSG5Q15238 335 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 SPATA46Q5T0L3 261 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 LPAR5Q9H1C0 372 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 NEU3Q9UQ49 428 aa12.8□□□□□ -0.36
PTPN13-203ENST00000427191 RALGAPA1Q6GYQ0 2036 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 TGIF2LYQ8IUE0 185 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 OR11G2Q8NGC1 345 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 OR2D3Q8NGH3 330 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 ACAA1P09110 424 aaPredicted RBP12.79□□□□□ -0.36
PTPN13-203ENST00000427191 GNG10P50151 68 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 RPS20P60866 119 aaKnown RBP12.79□□□□□ -0.36
PTPN13-203ENST00000427191 MRPL30Q8TCC3 161 aaKnown RBP12.79□□□□□ -0.36
PTPN13-203ENST00000427191 ABHD14BQ96IU4 210 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 OR2W1Q9Y3N9 320 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 A8MWL6 223 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 SPINK4O60575 86 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 SRD5A2P31213 254 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 GLCCI1Q86VQ1 547 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 ETFBKMTQ8IXQ9 262 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 PLEKHB1Q9UF11 243 aaPredicted RBP12.79□□□□□ -0.36
PTPN13-203ENST00000427191 MCM3APO60318 1980 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 HMGA1P17096 107 aaKnown RBP12.79□□□□□ -0.36
PTPN13-203ENST00000427191 CA6P23280 308 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 SKP2Q13309 424 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 GAMTQ14353 236 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 TWIST1Q15672 202 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 OR8I2Q8N0Y5 310 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 OR8A1Q8NGG7 326 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 PTX4Q96A99 478 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 CDAP32320 146 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 COMPP49747 757 aaPredicted RBP12.79□□□□□ -0.36
PTPN13-203ENST00000427191 FOXB2Q5VYV0 432 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 OLIG3Q7RTU3 272 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 MOB4Q9Y3A3 225 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 HLA-DQA1P01909 254 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 SPNP16150 400 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 NAT1P18440 290 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 PLP1P60201 277 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 CA5BP1Q8WTZ4 195 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 GPR61Q9BZJ8 451 aa12.79□□□□□ -0.36
PTPN13-203ENST00000427191 DNAJB12Q9NXW2 375 aaKnown RBP12.79□□□□□ -0.36
PTPN13-203ENST00000427191 CXorf65A6NEN9 183 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 SHISA7A6NL88 538 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 KCNAB3O43448 404 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 STPG3Q8N7X2 389 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 LRRC29Q8WV35 223 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 GAGE10A6NGK3 116 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 LYZL6O75951 148 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 PSMG4Q5JS54 123 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 NEURL2Q9BR09 285 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 CDKN2AP42771 156 aaKnown RBP12.78□□□□□ -0.36
PTPN13-203ENST00000427191 WNT3P56703 355 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 TNXAQ16473 311 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 CNRIP1Q96F85 164 aaPredicted RBP12.78□□□□□ -0.36
PTPN13-203ENST00000427191 UBE2L6O14933 153 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 NAAAQ02083 359 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 RTTNQ86VV8 2226 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 FGF8P55075 233 aaPredicted RBP12.78□□□□□ -0.36
PTPN13-203ENST00000427191 GABRG2P18507 467 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 GALNSP34059 522 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 HMGA2P52926 109 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 PAPPA-AS1Q5QFB9 102 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 NSUN5P2Q63ZY6 315 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 RSPO2Q6UXX9 243 aaPredicted RBP12.78□□□□□ -0.36
PTPN13-203ENST00000427191 C8orf44Q96CB5 159 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 TNRC6CQ9HCJ0 1690 aaKnown RBP12.78□□□□□ -0.36
PTPN13-203ENST00000427191 OR1L8Q8NGR8 309 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 SARGQ9BW04 601 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 HEXA-AS1Q9H8Q6 139 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 VSIG4Q9Y279 399 aa12.78□□□□□ -0.36
PTPN13-203ENST00000427191 TRBV9A0A0B4J1U6 114 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 NAT2P11245 290 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 OR3A4PP47883 348 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 ID4P47928 161 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 RAC3P60763 192 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 MRPS11P82912 194 aaKnown RBP12.77□□□□□ -0.36
PTPN13-203ENST00000427191 SPANXN1Q5VSR9 72 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 XAF1Q6GPH4 301 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 PARM1Q6UWI2 310 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 TSPAN32Q96QS1 320 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 GPR27Q9NS67 375 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 UQCR10Q9UDW1 63 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 ZMIZ1Q9ULJ6 1067 aa12.77□□□□□ -0.36
PTPN13-203ENST00000427191 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms