RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 IGLV3-1P01715 115 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 CD200P41217 278 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 CLDN15P56746 228 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 PKIAP61925 76 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 CNN3Q15417 329 aaKnown RBP11.24□□□□□ -0.61
COL12A1-205ENST00000425443 SECTM1Q8WVN6 248 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 C14orf79Q96F83 325 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 CNTNAP3Q9BZ76 1288 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 FIGNL2A6NMB9 653 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 C22orf46C9J442 243 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 PDZD11Q5EBL8 140 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 FOXL2NBQ6ZUU3 175 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 OR5L1Q8NGL2 311 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 CPT1CQ8TCG5 803 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 ABHD3Q8WU67 409 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 C10orf35Q96D05 121 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 CLCC1Q96S66 551 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 GPHA2Q96T91 129 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 ARRDC1-AS1Q9H2J1 176 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 FAM86C1Q9NVL1 165 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 TIMM10BQ9Y5J6 103 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 TMEM238C9JI98 176 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 K7EPK0 472 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 IFNA2P01563 188 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 SERPINA7P05543 415 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 CST2P09228 141 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 OR5H8P0DN80 308 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 RPL12P30050 165 aaKnown RBP11.24□□□□□ -0.61
COL12A1-205ENST00000425443 OTX1P32242 354 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-205ENST00000425443 TMEM33P57088 247 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 B3GALT5-AS1P59052 145 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 HIST1H3AP68431 136 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 HIST2H3PS2Q5TEC6 136 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 PEAR1Q5VY43 1037 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-205ENST00000425443 RTL6Q6ICC9 239 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 Q6ZRG5 221 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 HIST2H3AQ71DI3 136 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 FAM71E2Q8N5Q1 922 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 OR10D4PQ8NGN7 298 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 FNDC9Q8TBE3 224 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 WFDC1Q9HC57 220 aa11.24□□□□□ -0.61
COL12A1-205ENST00000425443 NRASP01111 189 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 FCGR2CP31995 323 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 CEACAM8P31997 349 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-205ENST00000425443 NTF4P34130 210 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 ZNF133P52736 654 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-205ENST00000425443 PIGPP57054 158 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 WDR73Q6P4I2 378 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 GGNQ86UU5 652 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 SGPP2Q8IWX5 399 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 PIGCQ92535 297 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 SPSB1Q96BD6 273 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 DEPPQ9NTK1 212 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 BOKQ9UMX3 212 aaPredicted RBP11.23□□□□□ -0.61
COL12A1-205ENST00000425443 SLC7A11Q9UPY5 501 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 GEMIN2O14893 280 aaKnown RBP11.23□□□□□ -0.61
COL12A1-205ENST00000425443 MRPL33O75394 65 aaKnown RBP11.23□□□□□ -0.61
COL12A1-205ENST00000425443 DEDDO75618 318 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 HIST1H1BP16401 226 aaKnown RBP11.23□□□□□ -0.61
COL12A1-205ENST00000425443 SULT1A2P50226 295 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 PCBD1P61457 104 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 ZNF616Q08AN1 781 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 ABCA11PQ4W5N1 156 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 ABHD17BQ5VST6 288 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 GGNBP1Q5YKI7 109 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 PRRG4Q9BZD6 226 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 CACFD1Q9UGQ2 172 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 AK3Q9UIJ7 227 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 RFNGQ9Y644 331 aa11.23□□□□□ -0.61
COL12A1-205ENST00000425443 DIDO1Q9BTC0 2240 aaKnown RBP11.23□□□□□ -0.61
COL12A1-205ENST00000425443 TNRC6BQ9UPQ9 1833 aaKnown RBP11.22□□□□□ -0.61
COL12A1-205ENST00000425443 IGKV1-27A0A075B6S5 117 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 SYNGR3O43761 229 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 C1QL1O75973 258 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 NXPH3O95157 252 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 TUBG1P23258 451 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 ACP1P24666 158 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 MPLP40238 635 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 ALDH3B1P43353 468 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 PSG4Q00888 419 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 TMEM164Q5U3C3 297 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 EMG1Q92979 244 aaKnown RBP11.22□□□□□ -0.61
COL12A1-205ENST00000425443 SAT2Q96F10 170 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-205ENST00000425443 TAAR9Q96RI9 348 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.22□□□□□ -0.61
COL12A1-205ENST00000425443 TUBG2Q9NRH3 451 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 ZDHHC8Q9ULC8 765 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 RP1L1Q8IWN7 2480 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-205ENST00000425443 ZNF716A6NP11 495 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 NDUFS8O00217 210 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 PHOX2AO14813 284 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 HEXAP06865 529 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 CCL2P13500 99 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 CEBPGP53567 150 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 EIF3IQ13347 325 aaKnown RBP11.22□□□□□ -0.61
COL12A1-205ENST00000425443 PLCXD3Q63HM9 321 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 RPUSD3Q6P087 351 aaKnown RBP11.22□□□□□ -0.61
COL12A1-205ENST00000425443 SUMF1Q8NBK3 374 aa11.22□□□□□ -0.61
COL12A1-205ENST00000425443 OR11L1Q8NGX0 322 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms