RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 AMY2AP04746 511 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 HCKP08631 526 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 HTR1AP08908 422 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM90A15PP0C7V4 464 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM90A13PP0C7W8 464 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM90A14PP0C7W9 464 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM90A24PP0C7X0 464 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR5H8P0DN80 308 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 HTR1FP30939 366 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 GLP1RP43220 463 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 KCNJ3P48549 501 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 INSL3P51460 131 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 KIR2DS1Q14954 304 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 TMEM65Q6PI78 240 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 LCNL1Q6ZST4 164 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 BCDIN3DQ7Z5W3 292 aaKnown RBP9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 STPG2Q8N412 459 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 DRAM1Q8N682 238 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CCDC197Q8NCU1 140 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR13C3Q8NGS6 347 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR2T10Q8NGZ9 312 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 P2RX4Q99571 388 aa9.71□□□□□ -0.86
HLA-DQB3-203ENST00000425319 DAPL1A0PJW8 107 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 SEC14L6B5MCN3 397 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CCRL2O00421 344 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IGKV1D-33P01593 117 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IGKV1-33P01594 117 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 MT-ND2P03891 347 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ISG15P05161 165 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ELANEP08246 267 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 VDAC1P21796 283 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CDX1P47902 265 aaPredicted RBP9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 MTNR1BP49286 362 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 DAPP51397 102 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 GPR50Q13585 617 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 PAN3Q58A45 887 aaKnown RBP9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAM27D1Q5T7N8 215 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FAHD1Q6P587 224 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 SERPINA12Q8IW75 414 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 C5orf56Q8N8D9 126 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR8J1Q8NGP2 316 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 RFT1Q96AA3 541 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 NOL4LQ96MY1 436 aaPredicted RBP9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 GPER1Q99527 375 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 S100A13Q99584 98 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CHCHD6Q9BRQ6 235 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 DCLRE1BQ9H816 532 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CALYQ9NYX4 217 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IL36RNQ9UBH0 155 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 SMAD5-AS1Q9Y6J3 95 aa9.7□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ZAR1LA6NP61 321 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 H0YJX3 145 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FOXE3Q13461 319 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ATXN7L3Q14CW9 347 aaPredicted RBP9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 C12orf73Q69YU5 71 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ETV3LQ6ZN32 361 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 TGIF2LXQ8IUE1 241 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 RDH10Q8IZV5 341 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR8H1Q8NGG4 311 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ADAT3Q96EY9 351 aaPredicted RBP9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 KIRREL1Q96J84 757 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 NR1H4Q96RI1 486 aaPredicted RBP9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 GHITMQ9H3K2 345 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ZCCHC4Q9H5U6 513 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ZMAT4Q9H898 229 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 LIN7CQ9NUP9 197 aaKnown RBP9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 LINC00527Q9UJ94 153 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 PSG11Q9UQ72 335 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ERGIC3Q9Y282 383 aa9.69□□□□□ -0.86
HLA-DQB3-203ENST00000425319 SLC33A1O00400 549 aaPredicted RBP9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FASP25445 335 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CHATP28329 748 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 GNG10P50151 68 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CCR9P51686 369 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 EFNB1P98172 346 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 LTC4SQ16873 150 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 C17orf58Q2M2W7 97 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ZNF260Q3ZCT1 412 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 TP53I3Q53FA7 332 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 BAIAP2L2Q6UXY1 529 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 PRSS35Q8N3Z0 413 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR5D18Q8NGL1 313 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR13C9Q8NGT0 318 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR2G2Q8NGZ5 317 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 TRUB1Q8WWH5 349 aaKnown RBP9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 UTP4Q969X6 686 aaKnown RBP9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ASCL2Q99929 193 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ABCG5Q9H222 651 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IMPAD1Q9NX62 359 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ZNF256Q9Y2P7 627 aaPredicted RBP9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 LSM4Q9Y4Z0 139 aaKnown RBP9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ORC6Q9Y5N6 252 aa9.68□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IGKV1-9A0A0C4DH69 117 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 HSPB6O14558 160 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 APOL3O95236 402 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IL1AP01583 271 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CSTBP04080 98 aaKnown RBP9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR8U8P0C7N1 319 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FCGR1AP12314 374 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 MRPL28Q13084 256 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms