RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 DPM3Q9P2X0 92 aa17.31■□□□□ 0.36
CDCP1-202ENST00000425231 TET2Q6N021 2002 aaPredicted RBP17.31■□□□□ 0.36
CDCP1-202ENST00000425231 A0A087X0M5 115 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 TRBV5-5A0A0J9YX44 114 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 A0A1B0GX30 115 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 FAM172BPA6NC97 362 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 ZNF729A6NN14 1252 aaPredicted RBP17.3■□□□□ 0.36
CDCP1-202ENST00000425231 HSPB6O14558 160 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 CASQ2O14958 399 aaPredicted RBP17.3■□□□□ 0.36
CDCP1-202ENST00000425231 CDRT1O95170 752 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 RPS11P62280 158 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDCP1-202ENST00000425231 DEFA6Q01524 100 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 RSU1Q15404 277 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 PIGYQ3MUY2 71 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 UTF1Q5T230 341 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 Q6ZTK2 550 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 ZNF596Q8TC21 504 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 PGLYRP3Q96LB9 341 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 FAM192AQ9GZU8 254 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 NCOR1P1Q9H4R4 102 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 ZNF286AQ9HBT8 521 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 CHCHD3Q9NX63 227 aaKnown RBP17.3■□□□□ 0.36
CDCP1-202ENST00000425231 F2RL2O00254 374 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 IGFBP3P17936 291 aaPredicted RBP17.3■□□□□ 0.36
CDCP1-202ENST00000425231 ZNF93P35789 620 aaPredicted RBP17.3■□□□□ 0.36
CDCP1-202ENST00000425231 CAPGP40121 348 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 MED21Q13503 144 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 C2orf68Q2NKX9 166 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 PAN3Q58A45 887 aaKnown RBP17.3■□□□□ 0.36
CDCP1-202ENST00000425231 DDI2Q5TDH0 399 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 HIST2H2BDQ6DRA6 164 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 ZFP41Q8N8Y5 198 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 OR4D6Q8NGJ1 314 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 FBLIM1Q8WUP2 373 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 ZNF581Q9P0T4 197 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 KIF25Q9UIL4 384 aa17.3■□□□□ 0.36
CDCP1-202ENST00000425231 KBTBD11-OT1A0A1B0GTJ5 212 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 GPX5O75715 221 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 HTR3BO95264 441 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 BDKRB2P30411 391 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 PPP3R1P63098 170 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 PAX5Q02548 391 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 YIF1BQ5BJH7 314 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 Q6ZS46 218 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 C8orf59Q8N0T1 100 aaPredicted RBP17.29■□□□□ 0.36
CDCP1-202ENST00000425231 C11orf44Q8N8P7 122 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 ZNF565Q8N9K5 539 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 BARHL1Q9BZE3 327 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 IL36GQ9NZH8 169 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 CNOT2Q9NZN8 540 aaKnown RBP17.29■□□□□ 0.36
CDCP1-202ENST00000425231 ING4Q9UNL4 249 aa17.29■□□□□ 0.36
CDCP1-202ENST00000425231 MEIKINA0A087WXM9 373 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 EFCAB10A6NFE3 127 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 XPNPEP2O43895 674 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 VSIG10L2P0DP72 767 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 BLCAPP62952 87 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 HLA-DRB5Q30154 266 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 Q499Y3 187 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 NHLRC3Q5JS37 347 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 RSBN1Q5VWQ0 802 aaPredicted RBP17.28■□□□□ 0.36
CDCP1-202ENST00000425231 OR13A1Q8NGR1 328 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 PLPPR1Q8TBJ4 325 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 KIRREL1Q96J84 757 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 PRSS22Q9GZN4 317 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 METTL9Q9H1A3 318 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 IFT22Q9H7X7 185 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 LINC00574Q9H8X3 128 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 PLCXD1Q9NUJ7 323 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 PSORS1C1Q9UIG5 152 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 ST3GAL6Q9Y274 331 aa17.28■□□□□ 0.36
CDCP1-202ENST00000425231 NOTCH1P46531 2555 aa17.27■□□□□ 0.36
CDCP1-202ENST00000425231 MAGEA13PA6NCF6 341 aa17.27■□□□□ 0.35
CDCP1-202ENST00000425231 LEUTXA8MZ59 168 aa17.27■□□□□ 0.35
CDCP1-202ENST00000425231 ANKRD65E5RJM6 399 aa17.27■□□□□ 0.35
CDCP1-202ENST00000425231 LY6LH3BQJ8 138 aa17.27■□□□□ 0.35
CDCP1-202ENST00000425231 BUB1B-PAK6H3BSN5 160 aa17.27■□□□□ 0.35
CDCP1-202ENST00000425231 CSF1P09603 554 aa17.27■□□□□ 0.35
CDCP1-202ENST00000425231 RIPK1Q13546 671 aa17.27■□□□□ 0.35
CDCP1-202ENST00000425231 DOC2BQ14184 412 aa17.27■□□□□ 0.35
CDCP1-202ENST00000425231 OSR2Q8N2R0 312 aa17.27■□□□□ 0.35
CDCP1-202ENST00000425231 FAM110DQ8TAY7 271 aaPredicted RBP17.27■□□□□ 0.35
CDCP1-202ENST00000425231 WIPF2Q8TF74 440 aaPredicted RBP17.27■□□□□ 0.35
CDCP1-202ENST00000425231 TRAV8-7A0A075B6U6 113 aa17.26■□□□□ 0.35
CDCP1-202ENST00000425231 CD24P25063 80 aa17.26■□□□□ 0.35
CDCP1-202ENST00000425231 C21orf33P30042 268 aaPredicted RBP17.26■□□□□ 0.35
CDCP1-202ENST00000425231 GLP1RP43220 463 aa17.26■□□□□ 0.35
CDCP1-202ENST00000425231 KCNJ3P48549 501 aa17.26■□□□□ 0.35
CDCP1-202ENST00000425231 PRRX1P54821 245 aa17.26■□□□□ 0.35
CDCP1-202ENST00000425231 RBM11P57052 281 aaKnown RBP17.26■□□□□ 0.35
CDCP1-202ENST00000425231 ZNF184Q99676 751 aaPredicted RBP17.26■□□□□ 0.35
CDCP1-202ENST00000425231 CALYQ9NYX4 217 aa17.26■□□□□ 0.35
CDCP1-202ENST00000425231 TRBV5-7A0A0A0MS05 114 aa17.25■□□□□ 0.35
CDCP1-202ENST00000425231 NPIPB11E5RHQ5 1161 aa17.25■□□□□ 0.35
CDCP1-202ENST00000425231 TOR1AO14656 332 aa17.25■□□□□ 0.35
CDCP1-202ENST00000425231 CSTBP04080 98 aaKnown RBP17.25■□□□□ 0.35
CDCP1-202ENST00000425231 FSTP19883 344 aa17.25■□□□□ 0.35
CDCP1-202ENST00000425231 NFYBP25208 207 aa17.25■□□□□ 0.35
CDCP1-202ENST00000425231 FBLN7Q53RD9 439 aa17.25■□□□□ 0.35
CDCP1-202ENST00000425231 SUMF2Q8NBJ7 301 aa17.25■□□□□ 0.35
CDCP1-202ENST00000425231 CREB3L1Q96BA8 519 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms