RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MAP2K4P45985 399 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 PSMD8P48556 350 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 CCL23P55773 120 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 DAD1P61803 113 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 TBPL1P62380 186 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 CACNG7P62955 275 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 C16orf72Q14CZ0 275 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 PAFAH1B3Q15102 231 aaKnown RBP2.88□□□□□ -1.95
SF3B1-205ENST00000424674 NSDHLQ15738 373 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 ATP6AP1LQ52LC2 224 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 ATAD3CQ5T2N8 411 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 C9orf64Q5T6V5 341 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 NANOGP8Q6NSW7 305 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 LPCAT3Q6P1A2 487 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 TEX43Q6ZNM6 134 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 GDPGP1Q6ZNW5 385 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 TCF24Q7RTU0 167 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 SLC35F6Q8N357 371 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 FAM24BQ8N5W8 94 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 STPG4Q8N801 248 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 OR11H6Q8NGC7 330 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 OR11H7Q8NGC8 314 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 OR9I1Q8NGQ6 314 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 OR5J2Q8NH18 312 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 OR4K15Q8NH41 348 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 LMO3Q8TAP4 145 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 GNPDA2Q8TDQ7 276 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 GEMIN6Q8WXD5 167 aaKnown RBP2.88□□□□□ -1.95
SF3B1-205ENST00000424674 DNAJC9Q8WXX5 260 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 BMFQ96LC9 184 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 DNAJC30Q96LL9 226 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 OR2A7Q96R45 310 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 OR4K3Q96R72 315 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 C12orf57Q99622 126 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 HSPB9Q9BQS6 159 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 TCEAL7Q9BRU2 100 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 RSPO3Q9BXY4 272 aaPredicted RBP2.88□□□□□ -1.95
SF3B1-205ENST00000424674 SRMSQ9H3Y6 488 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 NANOGQ9H9S0 305 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 LYRM2Q9NU23 88 aaPredicted RBP2.88□□□□□ -1.95
SF3B1-205ENST00000424674 TMEM100Q9NV29 134 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF226Q9NYT6 803 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 COPZ2Q9P299 210 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 DPM3Q9P2X0 92 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 RSL24D1Q9UHA3 163 aaKnown RBP2.88□□□□□ -1.95
SF3B1-205ENST00000424674 HES2Q9Y543 173 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 WSB1Q9Y6I7 421 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF518AQ6AHZ1 1483 aa2.88□□□□□ -1.95
SF3B1-205ENST00000424674 NPHP4O75161 1426 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-205ENST00000424674 PIK3C2GO75747 1445 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 A0A087WW49 117 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 BORCS7-ASMTA0A0B4J1R7 106 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 IGHV7-81A0A0B4J1V7 117 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 A0A1B0GXF2 115 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 A0A1W2PRE2 83 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 FAM25AB3EWG3 89 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 FAM25CB3EWG5 89 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 FAM25GB3EWG6 89 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 G3V2T6 193 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 TRAPPC2LH3BP13 241 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 NTN3O00634 580 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-205ENST00000424674 PSPHP1O15172 72 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 DLEU1O43261 78 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 MFSD11O43934 449 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 FGF17O60258 216 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 NPIPB7O75200 414 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 CDRT1O95170 752 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 CCNE2O96020 404 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 IFNA10P01566 189 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 HBZP02008 142 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 PFN1P07737 140 aaKnown RBP2.87□□□□□ -1.95
SF3B1-205ENST00000424674 RBP1P09455 135 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 OR56A5P0C7T3 313 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 CXCL2P19875 107 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 CXCL3P19876 107 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 RAB3AP20336 220 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 RAB13P51153 203 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 P2RX1P51575 399 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 CKS1BP61024 79 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 DYNLL1P63167 89 aaKnown RBP2.87□□□□□ -1.95
SF3B1-205ENST00000424674 RPS21P63220 83 aaKnown RBP2.87□□□□□ -1.95
SF3B1-205ENST00000424674 HPCAP84074 193 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF763Q0D2J5 394 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 TSPO2Q5TGU0 170 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 UNQ9370/PRO34162Q6UXP9 181 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 TMPPEQ6ZT21 453 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 H2AFVQ71UI9 128 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF550Q7Z398 422 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 C20orf196Q8IYI0 205 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF567Q8N184 647 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 GPR26Q8NDV2 337 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 NUP37Q8NFH4 326 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 OR10AD1Q8NGE0 317 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 OR52L1Q8NGH7 329 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 OR4D11Q8NGI4 311 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 OR9Q1Q8NGQ5 310 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 OR13A1Q8NGR1 328 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 OR8S1Q8NH09 359 aa2.87□□□□□ -1.95
SF3B1-205ENST00000424674 OR5K1Q8NHB7 308 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms