RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 OTULINQ96BN8 352 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 MBOAT4Q96T53 435 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 ABHD6Q9BV23 337 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 CST11Q9H112 138 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF580Q9UK33 172 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 APLNQ9ULZ1 77 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 GTF2A1LQ9UNN4 478 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 DHDHQ9UQ10 334 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 PSG11Q9UQ72 335 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 TP53TG1Q9Y2A0 90 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 A0A087X0M5 115 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 KBTBD11-OT1A0A1B0GTJ5 212 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 A0A1B0GX30 115 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 FAM90A10PA6NDY2 464 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 MSGN1A6NI15 193 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 SH2D1BO14796 132 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 IFNA10P01566 189 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 GYPBP06028 91 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 CSN3P07498 182 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 P0DMU3 169 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 FAM231AP0DMU4 169 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 FAM231CP0DMU5 169 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF44P15621 663 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 PRKACAP17612 351 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 OR3A1P47881 315 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 RPS16P62249 146 aaKnown RBP4.73□□□□□ -1.65
SDCBP-203ENST00000424270 TMEM267Q0VDI3 215 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF816Q0VGE8 651 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-203ENST00000424270 IL24Q13007 206 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 DYRK1AQ13627 763 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 EBI3Q14213 229 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 ATXN7L3Q14CW9 347 aaPredicted RBP4.73□□□□□ -1.65
SDCBP-203ENST00000424270 ACTBL2Q562R1 376 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 CLVS2Q5SYC1 327 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 UTF1Q5T230 341 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 C1orf134Q5TEV5 83 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 Q6ZWC4 215 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 PRSS45Q7RTY3 260 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 NR2C2APQ86WQ0 139 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 WFDC3Q8IUB2 231 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 Q8N6K4 173 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 RNF148Q8N7C7 305 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 POM121L12Q8N7R1 296 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF565Q8N9K5 539 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 UBALD1Q8TB05 177 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 THEM6Q8WUY1 208 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 ANAPC16Q96DE5 110 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 KIRREL1Q96J84 757 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 CGREF1Q99674 301 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF251Q9BRH9 671 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 CADM1Q9BY67 442 aaKnown RBP4.73□□□□□ -1.65
SDCBP-203ENST00000424270 PKIBQ9C010 78 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 OR52D1Q9H346 318 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 KAT8Q9H7Z6 458 aaKnown RBP4.73□□□□□ -1.65
SDCBP-203ENST00000424270 EXOSC4Q9NPD3 245 aaKnown RBP4.73□□□□□ -1.65
SDCBP-203ENST00000424270 PLSCR3Q9NRY6 295 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 DCAF13Q9NV06 445 aaKnown RBP4.73□□□□□ -1.65
SDCBP-203ENST00000424270 THAP1Q9NVV9 213 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 IDI2-AS1Q9NZ38 188 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 HAO1Q9UJM8 370 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 RNF150Q9ULK6 438 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 FAM32AQ9Y421 112 aaKnown RBP4.73□□□□□ -1.65
SDCBP-203ENST00000424270 SNX13Q9Y5W8 968 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 GMEB1Q9Y692 573 aa4.73□□□□□ -1.65
SDCBP-203ENST00000424270 FAT2Q9NYQ8 4349 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 MEIKINA0A087WXM9 373 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 A0A0B4J203 849 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 TMEM120BA0PK00 339 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 PQLC2LA1A4F0 135 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 A6NIN4 97 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF736B4DX44 427 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-203ENST00000424270 C11orf94C9JXX5 98 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 F8VVB4 439 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 F8VWA3 439 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 FAM229AH3BQW9 127 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 HSPB6O14558 160 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 ARPC3O15145 178 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 IDH3BO43837 385 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 H1F0P07305 194 aaKnown RBP4.72□□□□□ -1.65
SDCBP-203ENST00000424270 CD1BP29016 333 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 C21orf33P30042 268 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-203ENST00000424270 IDH3AP50213 366 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 NUDT2P50583 147 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 MFAP2P55001 183 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 CDC42P60953 191 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 ERVK11-1P61568 191 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 KLF5Q13887 457 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-203ENST00000424270 MED22Q15528 200 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 WHAMMP3Q1A5X7 153 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 LRRC36Q1X8D7 754 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 LIN54Q6MZP7 749 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 UNQ5815/PRO19632Q6UWF5 114 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 DLEU7Q6UYE1 221 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 SLC25A26Q70HW3 274 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 SLC15A3Q8IY34 581 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 Q8IYB0 196 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 Q8N3U1 123 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 TCTEX1D1Q8N7M0 179 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 MINDY2Q8NBR6 621 aa4.72□□□□□ -1.65
SDCBP-203ENST00000424270 RP9Q8TA86 221 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms