RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NCBP2LA6PVI3 153 aaKnown RBP13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 H3BSH0 61 aa13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 SLC33A1O00400 549 aaPredicted RBP13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 MPZL2O60487 215 aa13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 KDM4BO94953 1096 aa13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 RPP14O95059 124 aaKnown RBP13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 IGKV1D-12P01611 117 aa13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 TRIM25Q14258 630 aaKnown RBP13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 MYOZ3Q8TDC0 251 aa13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 LEAP2Q969E1 77 aa13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 RNFT2Q96EX2 444 aa13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 ADI1Q9BV57 179 aa13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 PPIL3Q9H2H8 161 aaKnown RBP13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 PLSCR3Q9NRY6 295 aa13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 IDI2-AS1Q9NZ38 188 aa13.03□□□□□ -0.32
CHCHD3-202ENST00000423635 NPIPB11E5RHQ5 1161 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 RRP9O43818 475 aaKnown RBP13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 IGHV3-7P01780 117 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 OR8U8P0C7N1 319 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 ANXA8P13928 327 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 ZNF44P15621 663 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 PRKACBP22694 351 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 VEGFCP49767 419 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 MS4A2Q01362 244 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 SCN1BQ07699 218 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 ZNF816Q0VGE8 651 aaPredicted RBP13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 ASPHD1Q5U4P2 390 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 LHFPL2Q6ZUX7 228 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 UTS2BQ765I0 119 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 IZUMO1Q8IYV9 350 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 YIPF7Q8N8F6 280 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 OR1N2Q8NGR9 330 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 OSBPL10Q9BXB5 764 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 ARL8BQ9NVJ2 186 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 ING3Q9NXR8 418 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 CALYQ9NYX4 217 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 ZNF580Q9UK33 172 aa13.02□□□□□ -0.33
CHCHD3-202ENST00000423635 IGHV1-3A0A0C4DH29 117 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 I3L521 148 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 PRKYO43930 277 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 KRT8P05787 483 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 ATF1P18846 271 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 PRKACGP22612 351 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 C21orf33P30042 268 aaPredicted RBP13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 EFNB1P98172 346 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 RUNX1Q01196 453 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 BNIP1Q12981 228 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 KIAA0141Q14154 515 aaPredicted RBP13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 ATXN7L3Q14CW9 347 aaPredicted RBP13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 AADACL4Q5VUY2 407 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 SSX6Q7RTT6 188 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 BCDIN3DQ7Z5W3 292 aaKnown RBP13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 HS3ST5Q8IZT8 346 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 FAM71E2Q8N5Q1 922 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 OR10A7Q8NGE5 316 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 OR51T1Q8NGJ9 327 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 OR2T10Q8NGZ9 312 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 ISOC1Q96CN7 298 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 ADAT3Q96EY9 351 aaPredicted RBP13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 UBE2E2Q96LR5 201 aa13.01□□□□□ -0.33
CHCHD3-202ENST00000423635 GNGT2O14610 69 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 HSD17B6O14756 317 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 DEGS1O15121 323 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 IL1AP01583 271 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 GAPDHP04406 335 aaKnown RBP13□□□□□ -0.33
CHCHD3-202ENST00000423635 IGF1P05019 195 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 GP9P14770 177 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 SPNP16150 400 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 MNAT1P51948 309 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 CRISP1P54107 249 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 ZNF616Q08AN1 781 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 NXNL2Q5VZ03 156 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 MOB3BQ86TA1 216 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 ARHGAP24Q8N264 748 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 PRSS35Q8N3Z0 413 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 OR13A1Q8NGR1 328 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 SPSB1Q96BD6 273 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 CHCHD6Q9BRQ6 235 aa13□□□□□ -0.33
CHCHD3-202ENST00000423635 H2AFY2Q9P0M6 372 aaPredicted RBP13□□□□□ -0.33
CHCHD3-202ENST00000423635 METTL15A6NJ78 407 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 LDLRAD4O15165 306 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 SNX3O60493 162 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 SULT1C4O75897 302 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 VDAC1P21796 283 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 HTR1FP30939 366 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 CDK5R1Q15078 307 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 SAXO1Q8IYX7 474 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 RDH10Q8IZV5 341 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 ZNF491Q8N8L2 437 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 OR10X1Q8NGY0 326 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 DCUN1D4Q92564 292 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 KCTD7Q96MP8 289 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 OPALINQ96PE5 141 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 S1PR3Q99500 378 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 RASL11BQ9BPW5 248 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 ISYNA1Q9NPH2 558 aa12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 CHCHD3Q9NX63 227 aaKnown RBP12.99□□□□□ -0.33
CHCHD3-202ENST00000423635 IGHV3-72A0A0B4J1Y9 119 aa12.98□□□□□ -0.33
CHCHD3-202ENST00000423635 LOC107986453A0A1B0GWG9 222 aa12.98□□□□□ -0.33
CHCHD3-202ENST00000423635 TRIM64CA6NLI5 447 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms