RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 IRF3Q14653 427 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 ATXN7L3Q14CW9 347 aaPredicted RBP8.92□□□□□ -0.98
USP49-204ENST00000423567 PIGYQ3MUY2 71 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 SLC22A6Q4U2R8 563 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 ACSM3Q53FZ2 586 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 AWAT1Q58HT5 328 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 AWAT2Q6E213 333 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 OR52W1Q6IF63 320 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 HCP5Q6MZN7 132 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 C11orf42Q8N5U0 333 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 BEND2Q8NDZ0 799 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 Q8NFD4 153 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 SGCDQ92629 289 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 MUL1Q969V5 352 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 NKX3-1Q99801 234 aaPredicted RBP8.92□□□□□ -0.98
USP49-204ENST00000423567 SLITRK2Q9H156 845 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 TAS2R3Q9NYW6 316 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 OR6C3Q9NZP0 311 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 ST3GAL6Q9Y274 331 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 MRPS28Q9Y2Q9 187 aaKnown RBP8.92□□□□□ -0.98
USP49-204ENST00000423567 LSM2Q9Y333 95 aaKnown RBP8.92□□□□□ -0.98
USP49-204ENST00000423567 SESN1Q9Y6P5 492 aa8.92□□□□□ -0.98
USP49-204ENST00000423567 A0A1B0GUS0 222 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 MAGEA13PA6NCF6 341 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 GPR137BO60478 399 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 PSMA1P25786 263 aaKnown RBP8.91□□□□□ -0.98
USP49-204ENST00000423567 CFPP27918 469 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 GLIPR1P48060 266 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 RBM11P57052 281 aaKnown RBP8.91□□□□□ -0.98
USP49-204ENST00000423567 TRAM1Q15629 374 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 NHLRC3Q5JS37 347 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 ATAD3CQ5T2N8 411 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 LIPKQ5VXJ0 399 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 GLT8D1Q68CQ7 371 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 GLIPR1L1Q6UWM5 242 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 TCF23Q7RTU1 214 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 ZNF565Q8N9K5 539 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 OR4D6Q8NGJ1 314 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 OR4F5Q8NH21 305 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 NEK7Q8TDX7 302 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 FOXRED1Q96CU9 486 aaPredicted RBP8.91□□□□□ -0.98
USP49-204ENST00000423567 UQCC2Q9BRT2 126 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 ISYNA1Q9NPH2 558 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 VPREB3Q9UKI3 123 aa8.91□□□□□ -0.98
USP49-204ENST00000423567 TBL2Q9Y4P3 447 aaKnown RBP8.91□□□□□ -0.98
USP49-204ENST00000423567 MEIKINA0A087WXM9 373 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 TRAV24A0A0B4J272 114 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 ZNF729A6NN14 1252 aaPredicted RBP8.9□□□□□ -0.98
USP49-204ENST00000423567 H3BUI4 141 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 PIN1P1O15428 100 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 GLP1RP43220 463 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 RAG2P55895 527 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 MLLT11Q13015 90 aaPredicted RBP8.9□□□□□ -0.98
USP49-204ENST00000423567 AANATQ16613 207 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 MPV17LQ2QL34 196 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 LRRC75BQ2VPJ9 315 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 HSD17B12Q53GQ0 312 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 OXLD1Q5BKU9 147 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 ZNF626Q68DY1 528 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 DHRS7BQ6IAN0 325 aaPredicted RBP8.9□□□□□ -0.98
USP49-204ENST00000423567 HEPN1Q6WQI6 88 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 CEACAM19Q7Z692 300 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 SUMF2Q8NBJ7 301 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 OR11H6Q8NGC7 330 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 PHYHIPQ92561 330 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 CORO2AQ92828 525 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 TMEM203Q969S6 136 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 MRPS24Q96EL2 167 aaKnown RBP8.9□□□□□ -0.98
USP49-204ENST00000423567 COQ2Q96H96 371 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 SSX3Q99909 188 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 DPCDQ9BVM2 203 aaPredicted RBP8.9□□□□□ -0.98
USP49-204ENST00000423567 CLEC7AQ9BXN2 247 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 CST11Q9H112 138 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 TMEM133Q9H2Q1 129 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 NCOR1P1Q9H4R4 102 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 IFT22Q9H7X7 185 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 BEX1Q9HBH7 125 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 SPACA1Q9HBV2 294 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 ABCB10Q9NRK6 738 aa8.9□□□□□ -0.98
USP49-204ENST00000423567 IGHV2-26A0A0B4J1V2 119 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 POM121CA8CG34 1229 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 ODF3BA8MYP8 253 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 H3BUX3 64 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 TOR1AO14656 332 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 GEMIN2O14893 280 aaKnown RBP8.89□□□□□ -0.99
USP49-204ENST00000423567 CRTAPO75718 401 aaPredicted RBP8.89□□□□□ -0.99
USP49-204ENST00000423567 ARL6IP5O75915 188 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 NDUFA7O95182 113 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 SRMP19623 302 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 OMGP23515 440 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 CDK2P24941 298 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 MAP2K4P45985 399 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 GABARAPL2P60520 117 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 TPBGQ13641 420 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 RBM39Q14498 530 aaKnown RBP8.89□□□□□ -0.99
USP49-204ENST00000423567 TBCEQ15813 527 aaPredicted RBP8.89□□□□□ -0.99
USP49-204ENST00000423567 TAF9Q16594 264 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 PRAMEF5Q5TYX0 476 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 UNQ9370/PRO34162Q6UXP9 181 aa8.89□□□□□ -0.99
USP49-204ENST00000423567 ZNF367Q7RTV3 350 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms